Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24141 | 72646;72647;72648 | chr2:178573711;178573710;178573709 | chr2:179438438;179438437;179438436 |
N2AB | 22500 | 67723;67724;67725 | chr2:178573711;178573710;178573709 | chr2:179438438;179438437;179438436 |
N2A | 21573 | 64942;64943;64944 | chr2:178573711;178573710;178573709 | chr2:179438438;179438437;179438436 |
N2B | 15076 | 45451;45452;45453 | chr2:178573711;178573710;178573709 | chr2:179438438;179438437;179438436 |
Novex-1 | 15201 | 45826;45827;45828 | chr2:178573711;178573710;178573709 | chr2:179438438;179438437;179438436 |
Novex-2 | 15268 | 46027;46028;46029 | chr2:178573711;178573710;178573709 | chr2:179438438;179438437;179438436 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | rs1458321606 | None | 0.014 | N | 0.446 | 0.041 | 0.33085137897 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
V/I | rs1458321606 | None | 0.014 | N | 0.446 | 0.041 | 0.33085137897 | gnomAD-4.0.0 | 6.57635E-06 | None | None | None | None | N | None | 2.41359E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.1873 | likely_benign | 0.1954 | benign | -1.656 | Destabilizing | 0.489 | N | 0.518 | neutral | N | 0.483926298 | None | None | N |
V/C | 0.5736 | likely_pathogenic | 0.6047 | pathogenic | -1.171 | Destabilizing | 0.998 | D | 0.688 | prob.neutral | None | None | None | None | N |
V/D | 0.4095 | ambiguous | 0.4454 | ambiguous | -1.748 | Destabilizing | 0.956 | D | 0.745 | deleterious | None | None | None | None | N |
V/E | 0.3358 | likely_benign | 0.3739 | ambiguous | -1.746 | Destabilizing | 0.942 | D | 0.651 | neutral | N | 0.490774912 | None | None | N |
V/F | 0.1272 | likely_benign | 0.1289 | benign | -1.296 | Destabilizing | 0.956 | D | 0.69 | prob.neutral | None | None | None | None | N |
V/G | 0.2417 | likely_benign | 0.263 | benign | -1.979 | Destabilizing | 0.89 | D | 0.685 | prob.neutral | N | 0.477182136 | None | None | N |
V/H | 0.4854 | ambiguous | 0.5012 | ambiguous | -1.482 | Destabilizing | 0.998 | D | 0.779 | deleterious | None | None | None | None | N |
V/I | 0.0693 | likely_benign | 0.0653 | benign | -0.858 | Destabilizing | 0.014 | N | 0.446 | neutral | N | 0.493796575 | None | None | N |
V/K | 0.4772 | ambiguous | 0.5169 | ambiguous | -1.36 | Destabilizing | 0.956 | D | 0.664 | neutral | None | None | None | None | N |
V/L | 0.1288 | likely_benign | 0.1224 | benign | -0.858 | Destabilizing | 0.247 | N | 0.49 | neutral | N | 0.470746357 | None | None | N |
V/M | 0.109 | likely_benign | 0.1111 | benign | -0.656 | Destabilizing | 0.956 | D | 0.617 | neutral | None | None | None | None | N |
V/N | 0.2335 | likely_benign | 0.2352 | benign | -1.178 | Destabilizing | 0.956 | D | 0.779 | deleterious | None | None | None | None | N |
V/P | 0.8989 | likely_pathogenic | 0.915 | pathogenic | -1.091 | Destabilizing | 0.978 | D | 0.722 | prob.delet. | None | None | None | None | N |
V/Q | 0.339 | likely_benign | 0.3607 | ambiguous | -1.381 | Destabilizing | 0.978 | D | 0.746 | deleterious | None | None | None | None | N |
V/R | 0.425 | ambiguous | 0.4665 | ambiguous | -0.805 | Destabilizing | 0.956 | D | 0.797 | deleterious | None | None | None | None | N |
V/S | 0.1692 | likely_benign | 0.1724 | benign | -1.694 | Destabilizing | 0.16 | N | 0.476 | neutral | None | None | None | None | N |
V/T | 0.1413 | likely_benign | 0.1439 | benign | -1.589 | Destabilizing | 0.754 | D | 0.531 | neutral | None | None | None | None | N |
V/W | 0.7364 | likely_pathogenic | 0.7461 | pathogenic | -1.485 | Destabilizing | 0.998 | D | 0.729 | prob.delet. | None | None | None | None | N |
V/Y | 0.4162 | ambiguous | 0.4162 | ambiguous | -1.212 | Destabilizing | 0.978 | D | 0.711 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.