Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24145 | 72658;72659;72660 | chr2:178573699;178573698;178573697 | chr2:179438426;179438425;179438424 |
N2AB | 22504 | 67735;67736;67737 | chr2:178573699;178573698;178573697 | chr2:179438426;179438425;179438424 |
N2A | 21577 | 64954;64955;64956 | chr2:178573699;178573698;178573697 | chr2:179438426;179438425;179438424 |
N2B | 15080 | 45463;45464;45465 | chr2:178573699;178573698;178573697 | chr2:179438426;179438425;179438424 |
Novex-1 | 15205 | 45838;45839;45840 | chr2:178573699;178573698;178573697 | chr2:179438426;179438425;179438424 |
Novex-2 | 15272 | 46039;46040;46041 | chr2:178573699;178573698;178573697 | chr2:179438426;179438425;179438424 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/L | rs758746801 | -0.909 | None | N | 0.095 | 0.076 | 0.187945064343 | gnomAD-2.1.1 | 9.17E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.9E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.0939 | likely_benign | 0.1074 | benign | -1.43 | Destabilizing | 0.002 | N | 0.285 | neutral | None | None | None | None | N |
F/C | 0.0944 | likely_benign | 0.0991 | benign | -0.427 | Destabilizing | 0.427 | N | 0.498 | neutral | N | 0.415007717 | None | None | N |
F/D | 0.1961 | likely_benign | 0.2319 | benign | 0.227 | Stabilizing | 0.018 | N | 0.421 | neutral | None | None | None | None | N |
F/E | 0.1924 | likely_benign | 0.2255 | benign | 0.229 | Stabilizing | 0.018 | N | 0.305 | neutral | None | None | None | None | N |
F/G | 0.1538 | likely_benign | 0.1814 | benign | -1.679 | Destabilizing | 0.004 | N | 0.275 | neutral | None | None | None | None | N |
F/H | 0.1072 | likely_benign | 0.1174 | benign | -0.135 | Destabilizing | 0.497 | N | 0.471 | neutral | None | None | None | None | N |
F/I | 0.071 | likely_benign | 0.0786 | benign | -0.75 | Destabilizing | None | N | 0.087 | neutral | N | 0.402097135 | None | None | N |
F/K | 0.1279 | likely_benign | 0.1596 | benign | -0.415 | Destabilizing | 0.004 | N | 0.264 | neutral | None | None | None | None | N |
F/L | 0.1318 | likely_benign | 0.1515 | benign | -0.75 | Destabilizing | None | N | 0.095 | neutral | N | 0.343126189 | None | None | N |
F/M | 0.0998 | likely_benign | 0.1145 | benign | -0.519 | Destabilizing | 0.022 | N | 0.389 | neutral | None | None | None | None | N |
F/N | 0.0944 | likely_benign | 0.1131 | benign | -0.307 | Destabilizing | 0.018 | N | 0.419 | neutral | None | None | None | None | N |
F/P | 0.5503 | ambiguous | 0.6614 | pathogenic | -0.961 | Destabilizing | 0.085 | N | 0.529 | neutral | None | None | None | None | N |
F/Q | 0.1107 | likely_benign | 0.1235 | benign | -0.416 | Destabilizing | 0.044 | N | 0.504 | neutral | None | None | None | None | N |
F/R | 0.1158 | likely_benign | 0.1407 | benign | 0.175 | Stabilizing | None | N | 0.359 | neutral | None | None | None | None | N |
F/S | 0.0674 | likely_benign | 0.0807 | benign | -1.031 | Destabilizing | None | N | 0.209 | neutral | N | 0.296889681 | None | None | N |
F/T | 0.1064 | likely_benign | 0.1255 | benign | -0.937 | Destabilizing | 0.004 | N | 0.248 | neutral | None | None | None | None | N |
F/V | 0.0711 | likely_benign | 0.0795 | benign | -0.961 | Destabilizing | 0.001 | N | 0.221 | neutral | N | 0.387551757 | None | None | N |
F/W | 0.186 | likely_benign | 0.2093 | benign | -0.355 | Destabilizing | 0.497 | N | 0.449 | neutral | None | None | None | None | N |
F/Y | 0.0716 | likely_benign | 0.0754 | benign | -0.417 | Destabilizing | 0.028 | N | 0.413 | neutral | N | 0.402443852 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.