Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24146 | 72661;72662;72663 | chr2:178573696;178573695;178573694 | chr2:179438423;179438422;179438421 |
N2AB | 22505 | 67738;67739;67740 | chr2:178573696;178573695;178573694 | chr2:179438423;179438422;179438421 |
N2A | 21578 | 64957;64958;64959 | chr2:178573696;178573695;178573694 | chr2:179438423;179438422;179438421 |
N2B | 15081 | 45466;45467;45468 | chr2:178573696;178573695;178573694 | chr2:179438423;179438422;179438421 |
Novex-1 | 15206 | 45841;45842;45843 | chr2:178573696;178573695;178573694 | chr2:179438423;179438422;179438421 |
Novex-2 | 15273 | 46042;46043;46044 | chr2:178573696;178573695;178573694 | chr2:179438423;179438422;179438421 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/R | rs1184232674 | -1.184 | 0.999 | N | 0.781 | 0.472 | 0.520586239559 | gnomAD-2.1.1 | 5.49E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 6.49E-05 | None | 0 | 0 | 0 |
P/R | rs1184232674 | -1.184 | 0.999 | N | 0.781 | 0.472 | 0.520586239559 | gnomAD-4.0.0 | 1.8529E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.42489E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.088 | likely_benign | 0.1008 | benign | -1.826 | Destabilizing | 0.998 | D | 0.597 | neutral | N | 0.501264052 | None | None | N |
P/C | 0.432 | ambiguous | 0.5135 | ambiguous | -1.189 | Destabilizing | 1.0 | D | 0.806 | deleterious | None | None | None | None | N |
P/D | 0.6282 | likely_pathogenic | 0.7001 | pathogenic | -2.041 | Highly Destabilizing | 1.0 | D | 0.689 | prob.neutral | None | None | None | None | N |
P/E | 0.3372 | likely_benign | 0.3776 | ambiguous | -1.905 | Destabilizing | 0.999 | D | 0.687 | prob.neutral | None | None | None | None | N |
P/F | 0.512 | ambiguous | 0.5954 | pathogenic | -1.189 | Destabilizing | 1.0 | D | 0.812 | deleterious | None | None | None | None | N |
P/G | 0.4353 | ambiguous | 0.4983 | ambiguous | -2.247 | Highly Destabilizing | 1.0 | D | 0.701 | prob.neutral | None | None | None | None | N |
P/H | 0.2052 | likely_benign | 0.2604 | benign | -1.68 | Destabilizing | 0.434 | N | 0.448 | neutral | N | 0.500053466 | None | None | N |
P/I | 0.2934 | likely_benign | 0.3499 | ambiguous | -0.697 | Destabilizing | 1.0 | D | 0.823 | deleterious | None | None | None | None | N |
P/K | 0.3259 | likely_benign | 0.3811 | ambiguous | -1.572 | Destabilizing | 1.0 | D | 0.683 | prob.neutral | None | None | None | None | N |
P/L | 0.1162 | likely_benign | 0.1373 | benign | -0.697 | Destabilizing | 0.999 | D | 0.769 | deleterious | N | 0.502015249 | None | None | N |
P/M | 0.3144 | likely_benign | 0.3663 | ambiguous | -0.612 | Destabilizing | 1.0 | D | 0.792 | deleterious | None | None | None | None | N |
P/N | 0.478 | ambiguous | 0.5562 | ambiguous | -1.645 | Destabilizing | 0.999 | D | 0.757 | deleterious | None | None | None | None | N |
P/Q | 0.1789 | likely_benign | 0.2062 | benign | -1.643 | Destabilizing | 1.0 | D | 0.763 | deleterious | None | None | None | None | N |
P/R | 0.2045 | likely_benign | 0.248 | benign | -1.195 | Destabilizing | 0.999 | D | 0.781 | deleterious | N | 0.49978675 | None | None | N |
P/S | 0.1457 | likely_benign | 0.1857 | benign | -2.195 | Highly Destabilizing | 0.999 | D | 0.691 | prob.neutral | N | 0.499533261 | None | None | N |
P/T | 0.1428 | likely_benign | 0.1809 | benign | -1.93 | Destabilizing | 1.0 | D | 0.717 | prob.delet. | N | 0.511801392 | None | None | N |
P/V | 0.2014 | likely_benign | 0.2397 | benign | -1.045 | Destabilizing | 1.0 | D | 0.757 | deleterious | None | None | None | None | N |
P/W | 0.6827 | likely_pathogenic | 0.7577 | pathogenic | -1.503 | Destabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | N |
P/Y | 0.4813 | ambiguous | 0.5782 | pathogenic | -1.16 | Destabilizing | 0.999 | D | 0.803 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.