Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24150 | 72673;72674;72675 | chr2:178573684;178573683;178573682 | chr2:179438411;179438410;179438409 |
N2AB | 22509 | 67750;67751;67752 | chr2:178573684;178573683;178573682 | chr2:179438411;179438410;179438409 |
N2A | 21582 | 64969;64970;64971 | chr2:178573684;178573683;178573682 | chr2:179438411;179438410;179438409 |
N2B | 15085 | 45478;45479;45480 | chr2:178573684;178573683;178573682 | chr2:179438411;179438410;179438409 |
Novex-1 | 15210 | 45853;45854;45855 | chr2:178573684;178573683;178573682 | chr2:179438411;179438410;179438409 |
Novex-2 | 15277 | 46054;46055;46056 | chr2:178573684;178573683;178573682 | chr2:179438411;179438410;179438409 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/E | None | None | 1.0 | N | 0.443 | 0.301 | 0.422762650823 | gnomAD-4.0.0 | 7.31337E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.36723E-07 | 0 | 0 |
D/N | None | None | 1.0 | N | 0.713 | 0.374 | 0.443999229985 | gnomAD-4.0.0 | 1.20034E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.31252E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.638 | likely_pathogenic | 0.7618 | pathogenic | -0.252 | Destabilizing | 1.0 | D | 0.718 | prob.delet. | N | 0.496349574 | None | None | I |
D/C | 0.9127 | likely_pathogenic | 0.9435 | pathogenic | 0.164 | Stabilizing | 1.0 | D | 0.655 | neutral | None | None | None | None | I |
D/E | 0.6672 | likely_pathogenic | 0.7647 | pathogenic | -0.593 | Destabilizing | 1.0 | D | 0.443 | neutral | N | 0.503400239 | None | None | I |
D/F | 0.9361 | likely_pathogenic | 0.9637 | pathogenic | -0.423 | Destabilizing | 1.0 | D | 0.647 | neutral | None | None | None | None | I |
D/G | 0.627 | likely_pathogenic | 0.7542 | pathogenic | -0.502 | Destabilizing | 1.0 | D | 0.704 | prob.neutral | N | 0.512024747 | None | None | I |
D/H | 0.7411 | likely_pathogenic | 0.8216 | pathogenic | -0.749 | Destabilizing | 1.0 | D | 0.655 | neutral | N | 0.514555961 | None | None | I |
D/I | 0.825 | likely_pathogenic | 0.8939 | pathogenic | 0.366 | Stabilizing | 1.0 | D | 0.676 | prob.neutral | None | None | None | None | I |
D/K | 0.8742 | likely_pathogenic | 0.9323 | pathogenic | 0.068 | Stabilizing | 1.0 | D | 0.745 | deleterious | None | None | None | None | I |
D/L | 0.8701 | likely_pathogenic | 0.9174 | pathogenic | 0.366 | Stabilizing | 1.0 | D | 0.693 | prob.neutral | None | None | None | None | I |
D/M | 0.9166 | likely_pathogenic | 0.957 | pathogenic | 0.779 | Stabilizing | 1.0 | D | 0.645 | neutral | None | None | None | None | I |
D/N | 0.1389 | likely_benign | 0.1568 | benign | -0.176 | Destabilizing | 1.0 | D | 0.713 | prob.delet. | N | 0.469282097 | None | None | I |
D/P | 0.9618 | likely_pathogenic | 0.9755 | pathogenic | 0.184 | Stabilizing | 1.0 | D | 0.743 | deleterious | None | None | None | None | I |
D/Q | 0.8432 | likely_pathogenic | 0.9101 | pathogenic | -0.115 | Destabilizing | 1.0 | D | 0.75 | deleterious | None | None | None | None | I |
D/R | 0.8766 | likely_pathogenic | 0.9298 | pathogenic | 0.018 | Stabilizing | 1.0 | D | 0.701 | prob.neutral | None | None | None | None | I |
D/S | 0.2875 | likely_benign | 0.401 | ambiguous | -0.307 | Destabilizing | 1.0 | D | 0.724 | prob.delet. | None | None | None | None | I |
D/T | 0.4512 | ambiguous | 0.6266 | pathogenic | -0.113 | Destabilizing | 1.0 | D | 0.755 | deleterious | None | None | None | None | I |
D/V | 0.6861 | likely_pathogenic | 0.7911 | pathogenic | 0.184 | Stabilizing | 1.0 | D | 0.696 | prob.neutral | D | 0.523759446 | None | None | I |
D/W | 0.9899 | likely_pathogenic | 0.9936 | pathogenic | -0.407 | Destabilizing | 1.0 | D | 0.651 | neutral | None | None | None | None | I |
D/Y | 0.6977 | likely_pathogenic | 0.7983 | pathogenic | -0.221 | Destabilizing | 1.0 | D | 0.629 | neutral | D | 0.528647745 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.