Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24155 | 72688;72689;72690 | chr2:178573669;178573668;178573667 | chr2:179438396;179438395;179438394 |
N2AB | 22514 | 67765;67766;67767 | chr2:178573669;178573668;178573667 | chr2:179438396;179438395;179438394 |
N2A | 21587 | 64984;64985;64986 | chr2:178573669;178573668;178573667 | chr2:179438396;179438395;179438394 |
N2B | 15090 | 45493;45494;45495 | chr2:178573669;178573668;178573667 | chr2:179438396;179438395;179438394 |
Novex-1 | 15215 | 45868;45869;45870 | chr2:178573669;178573668;178573667 | chr2:179438396;179438395;179438394 |
Novex-2 | 15282 | 46069;46070;46071 | chr2:178573669;178573668;178573667 | chr2:179438396;179438395;179438394 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | rs946539839 | None | 1.0 | D | 0.84 | 0.556 | 0.765966819243 | gnomAD-4.0.0 | 2.93253E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.75184E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.81 | likely_pathogenic | 0.8174 | pathogenic | -2.4 | Highly Destabilizing | 0.999 | D | 0.687 | prob.neutral | None | None | None | None | I |
I/C | 0.9438 | likely_pathogenic | 0.9486 | pathogenic | -1.391 | Destabilizing | 1.0 | D | 0.801 | deleterious | None | None | None | None | I |
I/D | 0.9963 | likely_pathogenic | 0.9955 | pathogenic | -2.463 | Highly Destabilizing | 1.0 | D | 0.883 | deleterious | None | None | None | None | I |
I/E | 0.9868 | likely_pathogenic | 0.9842 | pathogenic | -2.389 | Highly Destabilizing | 1.0 | D | 0.879 | deleterious | None | None | None | None | I |
I/F | 0.8653 | likely_pathogenic | 0.8486 | pathogenic | -1.651 | Destabilizing | 1.0 | D | 0.837 | deleterious | D | 0.540172316 | None | None | I |
I/G | 0.9831 | likely_pathogenic | 0.9831 | pathogenic | -2.812 | Highly Destabilizing | 1.0 | D | 0.876 | deleterious | None | None | None | None | I |
I/H | 0.9927 | likely_pathogenic | 0.9915 | pathogenic | -2.15 | Highly Destabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | I |
I/K | 0.9798 | likely_pathogenic | 0.9752 | pathogenic | -1.833 | Destabilizing | 1.0 | D | 0.882 | deleterious | None | None | None | None | I |
I/L | 0.3213 | likely_benign | 0.3293 | benign | -1.267 | Destabilizing | 0.993 | D | 0.431 | neutral | N | 0.491771353 | None | None | I |
I/M | 0.3115 | likely_benign | 0.3253 | benign | -0.858 | Destabilizing | 1.0 | D | 0.817 | deleterious | D | 0.549290576 | None | None | I |
I/N | 0.9413 | likely_pathogenic | 0.9364 | pathogenic | -1.745 | Destabilizing | 1.0 | D | 0.879 | deleterious | D | 0.543721169 | None | None | I |
I/P | 0.9334 | likely_pathogenic | 0.9357 | pathogenic | -1.62 | Destabilizing | 1.0 | D | 0.88 | deleterious | None | None | None | None | I |
I/Q | 0.9838 | likely_pathogenic | 0.9816 | pathogenic | -1.861 | Destabilizing | 1.0 | D | 0.854 | deleterious | None | None | None | None | I |
I/R | 0.9709 | likely_pathogenic | 0.9668 | pathogenic | -1.224 | Destabilizing | 1.0 | D | 0.876 | deleterious | None | None | None | None | I |
I/S | 0.918 | likely_pathogenic | 0.9177 | pathogenic | -2.341 | Highly Destabilizing | 1.0 | D | 0.872 | deleterious | D | 0.53818776 | None | None | I |
I/T | 0.5572 | ambiguous | 0.5729 | pathogenic | -2.152 | Highly Destabilizing | 1.0 | D | 0.84 | deleterious | D | 0.528971049 | None | None | I |
I/V | 0.0994 | likely_benign | 0.0996 | benign | -1.62 | Destabilizing | 0.993 | D | 0.407 | neutral | N | 0.503938998 | None | None | I |
I/W | 0.994 | likely_pathogenic | 0.9923 | pathogenic | -1.898 | Destabilizing | 1.0 | D | 0.807 | deleterious | None | None | None | None | I |
I/Y | 0.9787 | likely_pathogenic | 0.976 | pathogenic | -1.698 | Destabilizing | 1.0 | D | 0.862 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.