Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24168 | 72727;72728;72729 | chr2:178573630;178573629;178573628 | chr2:179438357;179438356;179438355 |
N2AB | 22527 | 67804;67805;67806 | chr2:178573630;178573629;178573628 | chr2:179438357;179438356;179438355 |
N2A | 21600 | 65023;65024;65025 | chr2:178573630;178573629;178573628 | chr2:179438357;179438356;179438355 |
N2B | 15103 | 45532;45533;45534 | chr2:178573630;178573629;178573628 | chr2:179438357;179438356;179438355 |
Novex-1 | 15228 | 45907;45908;45909 | chr2:178573630;178573629;178573628 | chr2:179438357;179438356;179438355 |
Novex-2 | 15295 | 46108;46109;46110 | chr2:178573630;178573629;178573628 | chr2:179438357;179438356;179438355 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/S | None | None | 0.988 | N | 0.534 | 0.435 | 0.750485479121 | gnomAD-4.0.0 | 1.9379E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.35891E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.7975 | likely_pathogenic | 0.8377 | pathogenic | -0.439 | Destabilizing | 0.938 | D | 0.528 | neutral | None | None | None | None | N |
L/C | 0.9359 | likely_pathogenic | 0.9622 | pathogenic | -0.788 | Destabilizing | 1.0 | D | 0.625 | neutral | None | None | None | None | N |
L/D | 0.9822 | likely_pathogenic | 0.9873 | pathogenic | -0.169 | Destabilizing | 0.991 | D | 0.655 | neutral | None | None | None | None | N |
L/E | 0.9173 | likely_pathogenic | 0.9352 | pathogenic | -0.259 | Destabilizing | 0.995 | D | 0.647 | neutral | None | None | None | None | N |
L/F | 0.6486 | likely_pathogenic | 0.7445 | pathogenic | -0.584 | Destabilizing | 0.998 | D | 0.601 | neutral | N | 0.511122467 | None | None | N |
L/G | 0.947 | likely_pathogenic | 0.963 | pathogenic | -0.539 | Destabilizing | 0.086 | N | 0.477 | neutral | None | None | None | None | N |
L/H | 0.8605 | likely_pathogenic | 0.9095 | pathogenic | 0.122 | Stabilizing | 1.0 | D | 0.673 | neutral | None | None | None | None | N |
L/I | 0.198 | likely_benign | 0.2407 | benign | -0.295 | Destabilizing | 0.995 | D | 0.519 | neutral | None | None | None | None | N |
L/K | 0.8332 | likely_pathogenic | 0.8526 | pathogenic | -0.314 | Destabilizing | 0.991 | D | 0.597 | neutral | None | None | None | None | N |
L/M | 0.3138 | likely_benign | 0.3731 | ambiguous | -0.593 | Destabilizing | 0.998 | D | 0.613 | neutral | N | 0.517806798 | None | None | N |
L/N | 0.9165 | likely_pathogenic | 0.9413 | pathogenic | -0.193 | Destabilizing | 0.991 | D | 0.651 | neutral | None | None | None | None | N |
L/P | 0.8268 | likely_pathogenic | 0.8924 | pathogenic | -0.315 | Destabilizing | 0.998 | D | 0.661 | neutral | None | None | None | None | N |
L/Q | 0.7631 | likely_pathogenic | 0.833 | pathogenic | -0.362 | Destabilizing | 0.998 | D | 0.622 | neutral | None | None | None | None | N |
L/R | 0.756 | likely_pathogenic | 0.7981 | pathogenic | 0.141 | Stabilizing | 0.995 | D | 0.612 | neutral | None | None | None | None | N |
L/S | 0.9114 | likely_pathogenic | 0.9505 | pathogenic | -0.586 | Destabilizing | 0.988 | D | 0.534 | neutral | N | 0.486329098 | None | None | N |
L/T | 0.8035 | likely_pathogenic | 0.8639 | pathogenic | -0.575 | Destabilizing | 0.995 | D | 0.578 | neutral | None | None | None | None | N |
L/V | 0.2871 | likely_benign | 0.3475 | ambiguous | -0.315 | Destabilizing | 0.979 | D | 0.53 | neutral | N | 0.480019201 | None | None | N |
L/W | 0.7893 | likely_pathogenic | 0.8415 | pathogenic | -0.604 | Destabilizing | 0.999 | D | 0.677 | prob.neutral | N | 0.511375956 | None | None | N |
L/Y | 0.8667 | likely_pathogenic | 0.9015 | pathogenic | -0.37 | Destabilizing | 0.998 | D | 0.618 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.