Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24171 | 72736;72737;72738 | chr2:178573621;178573620;178573619 | chr2:179438348;179438347;179438346 |
N2AB | 22530 | 67813;67814;67815 | chr2:178573621;178573620;178573619 | chr2:179438348;179438347;179438346 |
N2A | 21603 | 65032;65033;65034 | chr2:178573621;178573620;178573619 | chr2:179438348;179438347;179438346 |
N2B | 15106 | 45541;45542;45543 | chr2:178573621;178573620;178573619 | chr2:179438348;179438347;179438346 |
Novex-1 | 15231 | 45916;45917;45918 | chr2:178573621;178573620;178573619 | chr2:179438348;179438347;179438346 |
Novex-2 | 15298 | 46117;46118;46119 | chr2:178573621;178573620;178573619 | chr2:179438348;179438347;179438346 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs1365291247 | None | 0.998 | N | 0.691 | 0.419 | 0.44770609447 | gnomAD-4.0.0 | 5.83419E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.01046E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.2685 | likely_benign | 0.3338 | benign | -0.658 | Destabilizing | 0.825 | D | 0.501 | neutral | N | 0.506512369 | None | None | N |
T/C | 0.773 | likely_pathogenic | 0.8576 | pathogenic | -0.408 | Destabilizing | 1.0 | D | 0.694 | prob.neutral | None | None | None | None | N |
T/D | 0.9141 | likely_pathogenic | 0.9433 | pathogenic | 0.165 | Stabilizing | 0.991 | D | 0.647 | neutral | None | None | None | None | N |
T/E | 0.8554 | likely_pathogenic | 0.9059 | pathogenic | 0.139 | Stabilizing | 0.995 | D | 0.654 | neutral | None | None | None | None | N |
T/F | 0.7764 | likely_pathogenic | 0.8515 | pathogenic | -0.836 | Destabilizing | 0.998 | D | 0.717 | prob.delet. | None | None | None | None | N |
T/G | 0.6215 | likely_pathogenic | 0.6794 | pathogenic | -0.876 | Destabilizing | 0.086 | N | 0.339 | neutral | None | None | None | None | N |
T/H | 0.7411 | likely_pathogenic | 0.8191 | pathogenic | -1.066 | Destabilizing | 1.0 | D | 0.709 | prob.delet. | None | None | None | None | N |
T/I | 0.5398 | ambiguous | 0.6109 | pathogenic | -0.184 | Destabilizing | 0.998 | D | 0.691 | prob.neutral | N | 0.497335525 | None | None | N |
T/K | 0.8177 | likely_pathogenic | 0.8531 | pathogenic | -0.565 | Destabilizing | 0.988 | D | 0.663 | neutral | N | 0.513822343 | None | None | N |
T/L | 0.3575 | ambiguous | 0.4379 | ambiguous | -0.184 | Destabilizing | 0.984 | D | 0.603 | neutral | None | None | None | None | N |
T/M | 0.1939 | likely_benign | 0.2448 | benign | -0.038 | Destabilizing | 1.0 | D | 0.699 | prob.neutral | None | None | None | None | N |
T/N | 0.3657 | ambiguous | 0.4313 | ambiguous | -0.415 | Destabilizing | 0.991 | D | 0.635 | neutral | None | None | None | None | N |
T/P | 0.8331 | likely_pathogenic | 0.8379 | pathogenic | -0.31 | Destabilizing | 0.998 | D | 0.69 | prob.neutral | D | 0.523719767 | None | None | N |
T/Q | 0.649 | likely_pathogenic | 0.7233 | pathogenic | -0.583 | Destabilizing | 0.998 | D | 0.705 | prob.neutral | None | None | None | None | N |
T/R | 0.7561 | likely_pathogenic | 0.8162 | pathogenic | -0.29 | Destabilizing | 0.994 | D | 0.695 | prob.neutral | N | 0.514497134 | None | None | N |
T/S | 0.3228 | likely_benign | 0.405 | ambiguous | -0.71 | Destabilizing | 0.958 | D | 0.493 | neutral | N | 0.520500387 | None | None | N |
T/V | 0.3612 | ambiguous | 0.4405 | ambiguous | -0.31 | Destabilizing | 0.984 | D | 0.576 | neutral | None | None | None | None | N |
T/W | 0.9301 | likely_pathogenic | 0.9535 | pathogenic | -0.782 | Destabilizing | 1.0 | D | 0.725 | prob.delet. | None | None | None | None | N |
T/Y | 0.8012 | likely_pathogenic | 0.8751 | pathogenic | -0.545 | Destabilizing | 0.998 | D | 0.712 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.