Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24178 | 72757;72758;72759 | chr2:178573600;178573599;178573598 | chr2:179438327;179438326;179438325 |
N2AB | 22537 | 67834;67835;67836 | chr2:178573600;178573599;178573598 | chr2:179438327;179438326;179438325 |
N2A | 21610 | 65053;65054;65055 | chr2:178573600;178573599;178573598 | chr2:179438327;179438326;179438325 |
N2B | 15113 | 45562;45563;45564 | chr2:178573600;178573599;178573598 | chr2:179438327;179438326;179438325 |
Novex-1 | 15238 | 45937;45938;45939 | chr2:178573600;178573599;178573598 | chr2:179438327;179438326;179438325 |
Novex-2 | 15305 | 46138;46139;46140 | chr2:178573600;178573599;178573598 | chr2:179438327;179438326;179438325 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/H | None | None | 0.979 | N | 0.396 | 0.208 | 0.219573609325 | gnomAD-4.0.0 | 7.42763E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 1.80623E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.1039 | likely_benign | 0.1003 | benign | -0.128 | Destabilizing | 0.373 | N | 0.396 | neutral | None | None | None | None | N |
Q/C | 0.4912 | ambiguous | 0.4933 | ambiguous | -0.057 | Destabilizing | 0.996 | D | 0.361 | neutral | None | None | None | None | N |
Q/D | 0.2604 | likely_benign | 0.2511 | benign | 0.068 | Stabilizing | 0.742 | D | 0.383 | neutral | None | None | None | None | N |
Q/E | 0.0754 | likely_benign | 0.0728 | benign | 0.058 | Stabilizing | 0.472 | N | 0.337 | neutral | N | 0.435209631 | None | None | N |
Q/F | 0.585 | likely_pathogenic | 0.5431 | ambiguous | -0.315 | Destabilizing | 0.91 | D | 0.36 | neutral | None | None | None | None | N |
Q/G | 0.201 | likely_benign | 0.186 | benign | -0.314 | Destabilizing | 0.742 | D | 0.429 | neutral | None | None | None | None | N |
Q/H | 0.1774 | likely_benign | 0.1619 | benign | -0.024 | Destabilizing | 0.979 | D | 0.396 | neutral | N | 0.494623294 | None | None | N |
Q/I | 0.2615 | likely_benign | 0.2481 | benign | 0.276 | Stabilizing | 0.835 | D | 0.357 | neutral | None | None | None | None | N |
Q/K | 0.0883 | likely_benign | 0.0866 | benign | 0.03 | Stabilizing | 0.684 | D | 0.346 | neutral | N | 0.431593323 | None | None | N |
Q/L | 0.1052 | likely_benign | 0.1015 | benign | 0.276 | Stabilizing | 0.007 | N | 0.22 | neutral | D | 0.523868766 | None | None | N |
Q/M | 0.231 | likely_benign | 0.2289 | benign | 0.204 | Stabilizing | 0.91 | D | 0.401 | neutral | None | None | None | None | N |
Q/N | 0.1923 | likely_benign | 0.1807 | benign | -0.405 | Destabilizing | 0.953 | D | 0.368 | neutral | None | None | None | None | N |
Q/P | 0.0649 | likely_benign | 0.0624 | benign | 0.17 | Stabilizing | 0.003 | N | 0.169 | neutral | N | 0.442578321 | None | None | N |
Q/R | 0.1056 | likely_benign | 0.1005 | benign | 0.226 | Stabilizing | 0.815 | D | 0.383 | neutral | N | 0.442906395 | None | None | N |
Q/S | 0.1366 | likely_benign | 0.1324 | benign | -0.38 | Destabilizing | 0.742 | D | 0.342 | neutral | None | None | None | None | N |
Q/T | 0.1116 | likely_benign | 0.1074 | benign | -0.236 | Destabilizing | 0.742 | D | 0.427 | neutral | None | None | None | None | N |
Q/V | 0.1547 | likely_benign | 0.1508 | benign | 0.17 | Stabilizing | 0.59 | D | 0.414 | neutral | None | None | None | None | N |
Q/W | 0.5056 | ambiguous | 0.4462 | ambiguous | -0.336 | Destabilizing | 0.996 | D | 0.407 | neutral | None | None | None | None | N |
Q/Y | 0.3896 | ambiguous | 0.3726 | ambiguous | -0.06 | Destabilizing | 0.953 | D | 0.409 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.