Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24179 | 72760;72761;72762 | chr2:178573597;178573596;178573595 | chr2:179438324;179438323;179438322 |
N2AB | 22538 | 67837;67838;67839 | chr2:178573597;178573596;178573595 | chr2:179438324;179438323;179438322 |
N2A | 21611 | 65056;65057;65058 | chr2:178573597;178573596;178573595 | chr2:179438324;179438323;179438322 |
N2B | 15114 | 45565;45566;45567 | chr2:178573597;178573596;178573595 | chr2:179438324;179438323;179438322 |
Novex-1 | 15239 | 45940;45941;45942 | chr2:178573597;178573596;178573595 | chr2:179438324;179438323;179438322 |
Novex-2 | 15306 | 46141;46142;46143 | chr2:178573597;178573596;178573595 | chr2:179438324;179438323;179438322 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | rs1400549364 | -0.338 | None | N | 0.117 | 0.057 | 0.12205267543 | gnomAD-2.1.1 | 1E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 2.01E-05 | 0 |
V/I | rs1400549364 | -0.338 | None | N | 0.117 | 0.057 | 0.12205267543 | gnomAD-3.1.2 | 1.32E-05 | None | None | None | None | I | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
V/I | rs1400549364 | -0.338 | None | N | 0.117 | 0.057 | 0.12205267543 | gnomAD-4.0.0 | 6.67919E-06 | None | None | None | None | I | None | 1.40252E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 5.32982E-06 | 0 | 5.22612E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.1404 | likely_benign | 0.1385 | benign | -1.033 | Destabilizing | 0.001 | N | 0.078 | neutral | N | 0.407617598 | None | None | I |
V/C | 0.6698 | likely_pathogenic | 0.6599 | pathogenic | -0.802 | Destabilizing | 0.935 | D | 0.346 | neutral | None | None | None | None | I |
V/D | 0.2875 | likely_benign | 0.28 | benign | -0.95 | Destabilizing | 0.555 | D | 0.39 | neutral | None | None | None | None | I |
V/E | 0.281 | likely_benign | 0.2684 | benign | -0.938 | Destabilizing | 0.117 | N | 0.352 | neutral | N | 0.430126312 | None | None | I |
V/F | 0.1787 | likely_benign | 0.1662 | benign | -0.777 | Destabilizing | 0.235 | N | 0.387 | neutral | None | None | None | None | I |
V/G | 0.1426 | likely_benign | 0.1378 | benign | -1.297 | Destabilizing | 0.117 | N | 0.321 | neutral | N | 0.420645611 | None | None | I |
V/H | 0.5753 | likely_pathogenic | 0.5232 | ambiguous | -0.598 | Destabilizing | 0.935 | D | 0.375 | neutral | None | None | None | None | I |
V/I | 0.0943 | likely_benign | 0.0935 | benign | -0.411 | Destabilizing | None | N | 0.117 | neutral | N | 0.484849018 | None | None | I |
V/K | 0.4099 | ambiguous | 0.3818 | ambiguous | -0.864 | Destabilizing | 0.149 | N | 0.346 | neutral | None | None | None | None | I |
V/L | 0.2054 | likely_benign | 0.1971 | benign | -0.411 | Destabilizing | None | N | 0.079 | neutral | N | 0.465300465 | None | None | I |
V/M | 0.1452 | likely_benign | 0.142 | benign | -0.587 | Destabilizing | 0.38 | N | 0.375 | neutral | None | None | None | None | I |
V/N | 0.1956 | likely_benign | 0.1929 | benign | -0.801 | Destabilizing | 0.555 | D | 0.411 | neutral | None | None | None | None | I |
V/P | 0.5731 | likely_pathogenic | 0.6093 | pathogenic | -0.586 | Destabilizing | 0.001 | N | 0.263 | neutral | None | None | None | None | I |
V/Q | 0.356 | ambiguous | 0.3242 | benign | -0.916 | Destabilizing | 0.555 | D | 0.382 | neutral | None | None | None | None | I |
V/R | 0.4364 | ambiguous | 0.4017 | ambiguous | -0.394 | Destabilizing | 0.555 | D | 0.407 | neutral | None | None | None | None | I |
V/S | 0.1609 | likely_benign | 0.1621 | benign | -1.228 | Destabilizing | 0.081 | N | 0.291 | neutral | None | None | None | None | I |
V/T | 0.1511 | likely_benign | 0.1496 | benign | -1.101 | Destabilizing | 0.149 | N | 0.189 | neutral | None | None | None | None | I |
V/W | 0.8362 | likely_pathogenic | 0.7886 | pathogenic | -0.93 | Destabilizing | 0.935 | D | 0.473 | neutral | None | None | None | None | I |
V/Y | 0.5201 | ambiguous | 0.4869 | ambiguous | -0.622 | Destabilizing | 0.555 | D | 0.388 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.