Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC2417972760;72761;72762 chr2:178573597;178573596;178573595chr2:179438324;179438323;179438322
N2AB2253867837;67838;67839 chr2:178573597;178573596;178573595chr2:179438324;179438323;179438322
N2A2161165056;65057;65058 chr2:178573597;178573596;178573595chr2:179438324;179438323;179438322
N2B1511445565;45566;45567 chr2:178573597;178573596;178573595chr2:179438324;179438323;179438322
Novex-11523945940;45941;45942 chr2:178573597;178573596;178573595chr2:179438324;179438323;179438322
Novex-21530646141;46142;46143 chr2:178573597;178573596;178573595chr2:179438324;179438323;179438322
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: V
  • RefSeq wild type transcript codon: GTA
  • RefSeq wild type template codon: CAT
  • Domain: Fn3-63
  • Domain position: 58
  • Structural Position: 88
  • Q(SASA): 0.3237
  • Predicted PPI site: I

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
V/I rs1400549364 -0.338 None N 0.117 0.057 0.12205267543 gnomAD-2.1.1 1E-05 None None None None I None 0 0 None 0 0 None 0 None 0 2.01E-05 0
V/I rs1400549364 -0.338 None N 0.117 0.057 0.12205267543 gnomAD-3.1.2 1.32E-05 None None None None I None 2.41E-05 0 0 0 0 None 0 0 1.47E-05 0 0
V/I rs1400549364 -0.338 None N 0.117 0.057 0.12205267543 gnomAD-4.0.0 6.67919E-06 None None None None I None 1.40252E-05 0 None 0 0 None 0 0 5.32982E-06 0 5.22612E-05

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
V/A 0.1404 likely_benign 0.1385 benign -1.033 Destabilizing 0.001 N 0.078 neutral N 0.407617598 None None I
V/C 0.6698 likely_pathogenic 0.6599 pathogenic -0.802 Destabilizing 0.935 D 0.346 neutral None None None None I
V/D 0.2875 likely_benign 0.28 benign -0.95 Destabilizing 0.555 D 0.39 neutral None None None None I
V/E 0.281 likely_benign 0.2684 benign -0.938 Destabilizing 0.117 N 0.352 neutral N 0.430126312 None None I
V/F 0.1787 likely_benign 0.1662 benign -0.777 Destabilizing 0.235 N 0.387 neutral None None None None I
V/G 0.1426 likely_benign 0.1378 benign -1.297 Destabilizing 0.117 N 0.321 neutral N 0.420645611 None None I
V/H 0.5753 likely_pathogenic 0.5232 ambiguous -0.598 Destabilizing 0.935 D 0.375 neutral None None None None I
V/I 0.0943 likely_benign 0.0935 benign -0.411 Destabilizing None N 0.117 neutral N 0.484849018 None None I
V/K 0.4099 ambiguous 0.3818 ambiguous -0.864 Destabilizing 0.149 N 0.346 neutral None None None None I
V/L 0.2054 likely_benign 0.1971 benign -0.411 Destabilizing None N 0.079 neutral N 0.465300465 None None I
V/M 0.1452 likely_benign 0.142 benign -0.587 Destabilizing 0.38 N 0.375 neutral None None None None I
V/N 0.1956 likely_benign 0.1929 benign -0.801 Destabilizing 0.555 D 0.411 neutral None None None None I
V/P 0.5731 likely_pathogenic 0.6093 pathogenic -0.586 Destabilizing 0.001 N 0.263 neutral None None None None I
V/Q 0.356 ambiguous 0.3242 benign -0.916 Destabilizing 0.555 D 0.382 neutral None None None None I
V/R 0.4364 ambiguous 0.4017 ambiguous -0.394 Destabilizing 0.555 D 0.407 neutral None None None None I
V/S 0.1609 likely_benign 0.1621 benign -1.228 Destabilizing 0.081 N 0.291 neutral None None None None I
V/T 0.1511 likely_benign 0.1496 benign -1.101 Destabilizing 0.149 N 0.189 neutral None None None None I
V/W 0.8362 likely_pathogenic 0.7886 pathogenic -0.93 Destabilizing 0.935 D 0.473 neutral None None None None I
V/Y 0.5201 ambiguous 0.4869 ambiguous -0.622 Destabilizing 0.555 D 0.388 neutral None None None None I

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.