Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 2418 | 7477;7478;7479 | chr2:178773916;178773915;178773914 | chr2:179638643;179638642;179638641 |
N2AB | 2418 | 7477;7478;7479 | chr2:178773916;178773915;178773914 | chr2:179638643;179638642;179638641 |
N2A | 2418 | 7477;7478;7479 | chr2:178773916;178773915;178773914 | chr2:179638643;179638642;179638641 |
N2B | 2372 | 7339;7340;7341 | chr2:178773916;178773915;178773914 | chr2:179638643;179638642;179638641 |
Novex-1 | 2372 | 7339;7340;7341 | chr2:178773916;178773915;178773914 | chr2:179638643;179638642;179638641 |
Novex-2 | 2372 | 7339;7340;7341 | chr2:178773916;178773915;178773914 | chr2:179638643;179638642;179638641 |
Novex-3 | 2418 | 7477;7478;7479 | chr2:178773916;178773915;178773914 | chr2:179638643;179638642;179638641 |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | None | None | 0.704 | N | 0.413 | 0.207 | 0.230578612272 | gnomAD-4.0.0 | 1.59055E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.8566E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1119 | likely_benign | 0.112 | benign | -0.458 | Destabilizing | 0.704 | D | 0.413 | neutral | N | 0.505669359 | None | None | N |
T/C | 0.4193 | ambiguous | 0.3995 | ambiguous | -0.145 | Destabilizing | 0.999 | D | 0.392 | neutral | None | None | None | None | N |
T/D | 0.3553 | ambiguous | 0.3519 | ambiguous | -0.839 | Destabilizing | 0.884 | D | 0.379 | neutral | None | None | None | None | N |
T/E | 0.2706 | likely_benign | 0.2694 | benign | -0.877 | Destabilizing | 0.939 | D | 0.367 | neutral | None | None | None | None | N |
T/F | 0.3779 | ambiguous | 0.3688 | ambiguous | -0.766 | Destabilizing | 0.997 | D | 0.463 | neutral | None | None | None | None | N |
T/G | 0.2037 | likely_benign | 0.2022 | benign | -0.669 | Destabilizing | 0.863 | D | 0.43 | neutral | None | None | None | None | N |
T/H | 0.285 | likely_benign | 0.2775 | benign | -1.136 | Destabilizing | 0.991 | D | 0.461 | neutral | None | None | None | None | N |
T/I | 0.313 | likely_benign | 0.3055 | benign | 0.003 | Stabilizing | 0.988 | D | 0.344 | neutral | D | 0.630535392 | None | None | N |
T/K | 0.1627 | likely_benign | 0.1579 | benign | -0.657 | Destabilizing | 0.939 | D | 0.357 | neutral | None | None | None | None | N |
T/L | 0.1351 | likely_benign | 0.1314 | benign | 0.003 | Stabilizing | 0.969 | D | 0.355 | neutral | None | None | None | None | N |
T/M | 0.1163 | likely_benign | 0.118 | benign | 0.526 | Stabilizing | 0.999 | D | 0.375 | neutral | None | None | None | None | N |
T/N | 0.1176 | likely_benign | 0.1156 | benign | -0.573 | Destabilizing | 0.061 | N | 0.216 | neutral | N | 0.509622063 | None | None | N |
T/P | 0.4925 | ambiguous | 0.5075 | ambiguous | -0.12 | Destabilizing | 0.988 | D | 0.344 | neutral | D | 0.630654115 | None | None | N |
T/Q | 0.1784 | likely_benign | 0.1757 | benign | -0.865 | Destabilizing | 0.991 | D | 0.353 | neutral | None | None | None | None | N |
T/R | 0.1535 | likely_benign | 0.1517 | benign | -0.332 | Destabilizing | 0.991 | D | 0.332 | neutral | None | None | None | None | N |
T/S | 0.1074 | likely_benign | 0.1056 | benign | -0.664 | Destabilizing | 0.159 | N | 0.211 | neutral | N | 0.50152078 | None | None | N |
T/V | 0.2128 | likely_benign | 0.2045 | benign | -0.12 | Destabilizing | 0.969 | D | 0.379 | neutral | None | None | None | None | N |
T/W | 0.69 | likely_pathogenic | 0.682 | pathogenic | -0.787 | Destabilizing | 0.999 | D | 0.567 | neutral | None | None | None | None | N |
T/Y | 0.425 | ambiguous | 0.4157 | ambiguous | -0.51 | Destabilizing | 0.997 | D | 0.466 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.