Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24184 | 72775;72776;72777 | chr2:178573582;178573581;178573580 | chr2:179438309;179438308;179438307 |
N2AB | 22543 | 67852;67853;67854 | chr2:178573582;178573581;178573580 | chr2:179438309;179438308;179438307 |
N2A | 21616 | 65071;65072;65073 | chr2:178573582;178573581;178573580 | chr2:179438309;179438308;179438307 |
N2B | 15119 | 45580;45581;45582 | chr2:178573582;178573581;178573580 | chr2:179438309;179438308;179438307 |
Novex-1 | 15244 | 45955;45956;45957 | chr2:178573582;178573581;178573580 | chr2:179438309;179438308;179438307 |
Novex-2 | 15311 | 46156;46157;46158 | chr2:178573582;178573581;178573580 | chr2:179438309;179438308;179438307 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/G | None | None | 0.89 | D | 0.783 | 0.557 | 0.824973454226 | gnomAD-4.0.0 | 1.48974E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.89278E-06 | 0 | 0 |
V/I | None | None | 0.656 | N | 0.541 | 0.179 | 0.409533910539 | gnomAD-4.0.0 | 1.95044E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.3743E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.5617 | ambiguous | 0.6107 | pathogenic | -1.857 | Destabilizing | 0.014 | N | 0.341 | neutral | N | 0.476024182 | None | None | N |
V/C | 0.9119 | likely_pathogenic | 0.9288 | pathogenic | -1.372 | Destabilizing | 0.994 | D | 0.761 | deleterious | None | None | None | None | N |
V/D | 0.9914 | likely_pathogenic | 0.9909 | pathogenic | -2.32 | Highly Destabilizing | 0.971 | D | 0.836 | deleterious | N | 0.505155575 | None | None | N |
V/E | 0.9737 | likely_pathogenic | 0.9727 | pathogenic | -2.112 | Highly Destabilizing | 0.956 | D | 0.813 | deleterious | None | None | None | None | N |
V/F | 0.7476 | likely_pathogenic | 0.7617 | pathogenic | -1.118 | Destabilizing | 0.971 | D | 0.751 | deleterious | N | 0.514292926 | None | None | N |
V/G | 0.8419 | likely_pathogenic | 0.8537 | pathogenic | -2.377 | Highly Destabilizing | 0.89 | D | 0.783 | deleterious | D | 0.555949621 | None | None | N |
V/H | 0.9924 | likely_pathogenic | 0.9927 | pathogenic | -2.061 | Highly Destabilizing | 0.998 | D | 0.855 | deleterious | None | None | None | None | N |
V/I | 0.0968 | likely_benign | 0.0894 | benign | -0.425 | Destabilizing | 0.656 | D | 0.541 | neutral | N | 0.486563958 | None | None | N |
V/K | 0.9888 | likely_pathogenic | 0.9891 | pathogenic | -1.695 | Destabilizing | 0.956 | D | 0.817 | deleterious | None | None | None | None | N |
V/L | 0.5954 | likely_pathogenic | 0.607 | pathogenic | -0.425 | Destabilizing | 0.489 | N | 0.663 | neutral | N | 0.473620056 | None | None | N |
V/M | 0.5428 | ambiguous | 0.5595 | ambiguous | -0.407 | Destabilizing | 0.993 | D | 0.716 | prob.delet. | None | None | None | None | N |
V/N | 0.966 | likely_pathogenic | 0.9661 | pathogenic | -1.983 | Destabilizing | 0.978 | D | 0.847 | deleterious | None | None | None | None | N |
V/P | 0.9816 | likely_pathogenic | 0.9847 | pathogenic | -0.873 | Destabilizing | 0.978 | D | 0.819 | deleterious | None | None | None | None | N |
V/Q | 0.9766 | likely_pathogenic | 0.9775 | pathogenic | -1.836 | Destabilizing | 0.978 | D | 0.833 | deleterious | None | None | None | None | N |
V/R | 0.9843 | likely_pathogenic | 0.9846 | pathogenic | -1.511 | Destabilizing | 0.956 | D | 0.831 | deleterious | None | None | None | None | N |
V/S | 0.8831 | likely_pathogenic | 0.8953 | pathogenic | -2.585 | Highly Destabilizing | 0.915 | D | 0.778 | deleterious | None | None | None | None | N |
V/T | 0.7554 | likely_pathogenic | 0.7823 | pathogenic | -2.225 | Highly Destabilizing | 0.86 | D | 0.64 | neutral | None | None | None | None | N |
V/W | 0.9952 | likely_pathogenic | 0.9954 | pathogenic | -1.595 | Destabilizing | 0.998 | D | 0.823 | deleterious | None | None | None | None | N |
V/Y | 0.9688 | likely_pathogenic | 0.9723 | pathogenic | -1.179 | Destabilizing | 0.993 | D | 0.747 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.