Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24188 | 72787;72788;72789 | chr2:178573570;178573569;178573568 | chr2:179438297;179438296;179438295 |
N2AB | 22547 | 67864;67865;67866 | chr2:178573570;178573569;178573568 | chr2:179438297;179438296;179438295 |
N2A | 21620 | 65083;65084;65085 | chr2:178573570;178573569;178573568 | chr2:179438297;179438296;179438295 |
N2B | 15123 | 45592;45593;45594 | chr2:178573570;178573569;178573568 | chr2:179438297;179438296;179438295 |
Novex-1 | 15248 | 45967;45968;45969 | chr2:178573570;178573569;178573568 | chr2:179438297;179438296;179438295 |
Novex-2 | 15315 | 46168;46169;46170 | chr2:178573570;178573569;178573568 | chr2:179438297;179438296;179438295 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | None | None | 0.998 | N | 0.688 | 0.253 | 0.354822389136 | gnomAD-4.0.0 | 2.97461E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.78089E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.883 | likely_pathogenic | 0.9289 | pathogenic | -1.113 | Destabilizing | 0.968 | D | 0.537 | neutral | None | None | None | None | N |
L/C | 0.9238 | likely_pathogenic | 0.9586 | pathogenic | -0.772 | Destabilizing | 1.0 | D | 0.66 | neutral | None | None | None | None | N |
L/D | 0.9926 | likely_pathogenic | 0.9965 | pathogenic | -0.207 | Destabilizing | 0.991 | D | 0.71 | prob.delet. | None | None | None | None | N |
L/E | 0.9503 | likely_pathogenic | 0.9769 | pathogenic | -0.232 | Destabilizing | 0.982 | D | 0.644 | neutral | None | None | None | None | N |
L/F | 0.6498 | likely_pathogenic | 0.786 | pathogenic | -0.756 | Destabilizing | 0.998 | D | 0.688 | prob.neutral | N | 0.503666852 | None | None | N |
L/G | 0.9659 | likely_pathogenic | 0.9815 | pathogenic | -1.381 | Destabilizing | 0.991 | D | 0.706 | prob.neutral | None | None | None | None | N |
L/H | 0.8509 | likely_pathogenic | 0.9364 | pathogenic | -0.46 | Destabilizing | 0.999 | D | 0.683 | prob.neutral | None | None | None | None | N |
L/I | 0.2384 | likely_benign | 0.3097 | benign | -0.484 | Destabilizing | 0.984 | D | 0.469 | neutral | None | None | None | None | N |
L/K | 0.8837 | likely_pathogenic | 0.9381 | pathogenic | -0.602 | Destabilizing | 0.982 | D | 0.612 | neutral | None | None | None | None | N |
L/M | 0.3325 | likely_benign | 0.4819 | ambiguous | -0.492 | Destabilizing | 0.994 | D | 0.682 | prob.neutral | N | 0.5112089 | None | None | N |
L/N | 0.9354 | likely_pathogenic | 0.9692 | pathogenic | -0.42 | Destabilizing | 0.991 | D | 0.717 | prob.delet. | None | None | None | None | N |
L/P | 0.9653 | likely_pathogenic | 0.9726 | pathogenic | -0.66 | Destabilizing | 0.995 | D | 0.726 | prob.delet. | None | None | None | None | N |
L/Q | 0.7166 | likely_pathogenic | 0.8801 | pathogenic | -0.578 | Destabilizing | 0.682 | D | 0.414 | neutral | None | None | None | None | N |
L/R | 0.7964 | likely_pathogenic | 0.8811 | pathogenic | -0.048 | Destabilizing | 0.982 | D | 0.694 | prob.neutral | None | None | None | None | N |
L/S | 0.9398 | likely_pathogenic | 0.9748 | pathogenic | -1.042 | Destabilizing | 0.988 | D | 0.626 | neutral | N | 0.487465248 | None | None | N |
L/T | 0.8689 | likely_pathogenic | 0.9401 | pathogenic | -0.942 | Destabilizing | 0.991 | D | 0.643 | neutral | None | None | None | None | N |
L/V | 0.4034 | ambiguous | 0.5366 | ambiguous | -0.66 | Destabilizing | 0.958 | D | 0.441 | neutral | N | 0.470130281 | None | None | N |
L/W | 0.8101 | likely_pathogenic | 0.8987 | pathogenic | -0.765 | Destabilizing | 0.999 | D | 0.709 | prob.delet. | N | 0.510744073 | None | None | N |
L/Y | 0.8905 | likely_pathogenic | 0.9484 | pathogenic | -0.539 | Destabilizing | 0.998 | D | 0.715 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.