Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24189 | 72790;72791;72792 | chr2:178573567;178573566;178573565 | chr2:179438294;179438293;179438292 |
N2AB | 22548 | 67867;67868;67869 | chr2:178573567;178573566;178573565 | chr2:179438294;179438293;179438292 |
N2A | 21621 | 65086;65087;65088 | chr2:178573567;178573566;178573565 | chr2:179438294;179438293;179438292 |
N2B | 15124 | 45595;45596;45597 | chr2:178573567;178573566;178573565 | chr2:179438294;179438293;179438292 |
Novex-1 | 15249 | 45970;45971;45972 | chr2:178573567;178573566;178573565 | chr2:179438294;179438293;179438292 |
Novex-2 | 15316 | 46171;46172;46173 | chr2:178573567;178573566;178573565 | chr2:179438294;179438293;179438292 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/R | None | None | 0.977 | N | 0.651 | 0.282 | 0.457922657367 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 6.07533E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.228 | likely_benign | 0.2516 | benign | -0.04 | Destabilizing | 0.983 | D | 0.599 | neutral | None | None | None | None | N |
K/C | 0.5661 | likely_pathogenic | 0.6205 | pathogenic | -0.125 | Destabilizing | 1.0 | D | 0.755 | deleterious | None | None | None | None | N |
K/D | 0.5212 | ambiguous | 0.5634 | ambiguous | 0.114 | Stabilizing | 0.966 | D | 0.653 | neutral | None | None | None | None | N |
K/E | 0.1409 | likely_benign | 0.1421 | benign | 0.116 | Stabilizing | 0.117 | N | 0.276 | neutral | N | 0.404193291 | None | None | N |
K/F | 0.7375 | likely_pathogenic | 0.7695 | pathogenic | -0.278 | Destabilizing | 1.0 | D | 0.714 | prob.delet. | None | None | None | None | N |
K/G | 0.4053 | ambiguous | 0.421 | ambiguous | -0.246 | Destabilizing | 0.995 | D | 0.641 | neutral | None | None | None | None | N |
K/H | 0.2546 | likely_benign | 0.2835 | benign | -0.616 | Destabilizing | 0.999 | D | 0.641 | neutral | None | None | None | None | N |
K/I | 0.3366 | likely_benign | 0.3679 | ambiguous | 0.424 | Stabilizing | 0.997 | D | 0.738 | prob.delet. | D | 0.523983409 | None | None | N |
K/L | 0.3167 | likely_benign | 0.3444 | ambiguous | 0.424 | Stabilizing | 0.995 | D | 0.651 | neutral | None | None | None | None | N |
K/M | 0.2181 | likely_benign | 0.2374 | benign | 0.375 | Stabilizing | 1.0 | D | 0.638 | neutral | None | None | None | None | N |
K/N | 0.3901 | ambiguous | 0.4285 | ambiguous | 0.304 | Stabilizing | 0.993 | D | 0.725 | prob.delet. | N | 0.498143602 | None | None | N |
K/P | 0.3049 | likely_benign | 0.3382 | benign | 0.298 | Stabilizing | 0.998 | D | 0.673 | neutral | None | None | None | None | N |
K/Q | 0.1031 | likely_benign | 0.1078 | benign | 0.074 | Stabilizing | 0.987 | D | 0.718 | prob.delet. | N | 0.452083238 | None | None | N |
K/R | 0.081 | likely_benign | 0.0809 | benign | 0.006 | Stabilizing | 0.977 | D | 0.651 | neutral | N | 0.494815295 | None | None | N |
K/S | 0.3331 | likely_benign | 0.3656 | ambiguous | -0.23 | Destabilizing | 0.983 | D | 0.65 | neutral | None | None | None | None | N |
K/T | 0.1571 | likely_benign | 0.183 | benign | -0.077 | Destabilizing | 0.993 | D | 0.671 | neutral | N | 0.514766493 | None | None | N |
K/V | 0.2875 | likely_benign | 0.3109 | benign | 0.298 | Stabilizing | 0.998 | D | 0.694 | prob.neutral | None | None | None | None | N |
K/W | 0.7214 | likely_pathogenic | 0.7464 | pathogenic | -0.251 | Destabilizing | 1.0 | D | 0.758 | deleterious | None | None | None | None | N |
K/Y | 0.5939 | likely_pathogenic | 0.6369 | pathogenic | 0.11 | Stabilizing | 0.999 | D | 0.695 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.