Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24190 | 72793;72794;72795 | chr2:178573564;178573563;178573562 | chr2:179438291;179438290;179438289 |
N2AB | 22549 | 67870;67871;67872 | chr2:178573564;178573563;178573562 | chr2:179438291;179438290;179438289 |
N2A | 21622 | 65089;65090;65091 | chr2:178573564;178573563;178573562 | chr2:179438291;179438290;179438289 |
N2B | 15125 | 45598;45599;45600 | chr2:178573564;178573563;178573562 | chr2:179438291;179438290;179438289 |
Novex-1 | 15250 | 45973;45974;45975 | chr2:178573564;178573563;178573562 | chr2:179438291;179438290;179438289 |
Novex-2 | 15317 | 46174;46175;46176 | chr2:178573564;178573563;178573562 | chr2:179438291;179438290;179438289 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/V | rs1246622936 | None | 0.96 | D | 0.868 | 0.483 | 0.614967603648 | gnomAD-4.0.0 | 7.43645E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.45217E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.4773 | ambiguous | 0.5298 | ambiguous | -0.395 | Destabilizing | 0.775 | D | 0.623 | neutral | N | 0.502548682 | None | None | N |
G/C | 0.528 | ambiguous | 0.6012 | pathogenic | -0.875 | Destabilizing | 0.995 | D | 0.856 | deleterious | D | 0.544735127 | None | None | N |
G/D | 0.3011 | likely_benign | 0.326 | benign | -0.675 | Destabilizing | 0.924 | D | 0.787 | deleterious | N | 0.520199316 | None | None | N |
G/E | 0.5251 | ambiguous | 0.5669 | pathogenic | -0.818 | Destabilizing | 0.941 | D | 0.859 | deleterious | None | None | None | None | N |
G/F | 0.8882 | likely_pathogenic | 0.9095 | pathogenic | -0.968 | Destabilizing | 0.996 | D | 0.869 | deleterious | None | None | None | None | N |
G/H | 0.6846 | likely_pathogenic | 0.7213 | pathogenic | -0.691 | Destabilizing | 0.996 | D | 0.853 | deleterious | None | None | None | None | N |
G/I | 0.8956 | likely_pathogenic | 0.9184 | pathogenic | -0.396 | Destabilizing | 0.992 | D | 0.868 | deleterious | None | None | None | None | N |
G/K | 0.8066 | likely_pathogenic | 0.8395 | pathogenic | -1.028 | Destabilizing | 0.941 | D | 0.862 | deleterious | None | None | None | None | N |
G/L | 0.8584 | likely_pathogenic | 0.8897 | pathogenic | -0.396 | Destabilizing | 0.97 | D | 0.861 | deleterious | None | None | None | None | N |
G/M | 0.835 | likely_pathogenic | 0.8789 | pathogenic | -0.427 | Destabilizing | 0.999 | D | 0.849 | deleterious | None | None | None | None | N |
G/N | 0.2909 | likely_benign | 0.3134 | benign | -0.634 | Destabilizing | 0.941 | D | 0.816 | deleterious | None | None | None | None | N |
G/P | 0.99 | likely_pathogenic | 0.99 | pathogenic | -0.359 | Destabilizing | 0.97 | D | 0.873 | deleterious | None | None | None | None | N |
G/Q | 0.6456 | likely_pathogenic | 0.6889 | pathogenic | -0.905 | Destabilizing | 0.992 | D | 0.878 | deleterious | None | None | None | None | N |
G/R | 0.7339 | likely_pathogenic | 0.7744 | pathogenic | -0.561 | Destabilizing | 0.96 | D | 0.88 | deleterious | D | 0.525363424 | None | None | N |
G/S | 0.2208 | likely_benign | 0.2597 | benign | -0.812 | Destabilizing | 0.048 | N | 0.645 | neutral | N | 0.506472248 | None | None | N |
G/T | 0.5343 | ambiguous | 0.6174 | pathogenic | -0.883 | Destabilizing | 0.941 | D | 0.854 | deleterious | None | None | None | None | N |
G/V | 0.8094 | likely_pathogenic | 0.8425 | pathogenic | -0.359 | Destabilizing | 0.96 | D | 0.868 | deleterious | D | 0.523655131 | None | None | N |
G/W | 0.7519 | likely_pathogenic | 0.7969 | pathogenic | -1.166 | Destabilizing | 0.999 | D | 0.854 | deleterious | None | None | None | None | N |
G/Y | 0.717 | likely_pathogenic | 0.7587 | pathogenic | -0.812 | Destabilizing | 0.996 | D | 0.864 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.