Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24191 | 72796;72797;72798 | chr2:178573561;178573560;178573559 | chr2:179438288;179438287;179438286 |
N2AB | 22550 | 67873;67874;67875 | chr2:178573561;178573560;178573559 | chr2:179438288;179438287;179438286 |
N2A | 21623 | 65092;65093;65094 | chr2:178573561;178573560;178573559 | chr2:179438288;179438287;179438286 |
N2B | 15126 | 45601;45602;45603 | chr2:178573561;178573560;178573559 | chr2:179438288;179438287;179438286 |
Novex-1 | 15251 | 45976;45977;45978 | chr2:178573561;178573560;178573559 | chr2:179438288;179438287;179438286 |
Novex-2 | 15318 | 46177;46178;46179 | chr2:178573561;178573560;178573559 | chr2:179438288;179438287;179438286 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/S | rs1479698498 | None | 0.892 | N | 0.43 | 0.3 | 0.209622950755 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
N/S | rs1479698498 | None | 0.892 | N | 0.43 | 0.3 | 0.209622950755 | gnomAD-4.0.0 | 2.00286E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.66328E-06 | 0 | 0 |
N/Y | None | None | 0.994 | N | 0.682 | 0.492 | 0.430579932962 | gnomAD-4.0.0 | 1.94866E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.89805E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.7783 | likely_pathogenic | 0.8214 | pathogenic | -0.991 | Destabilizing | 0.845 | D | 0.541 | neutral | None | None | None | None | N |
N/C | 0.5779 | likely_pathogenic | 0.6423 | pathogenic | -0.038 | Destabilizing | 0.073 | N | 0.421 | neutral | None | None | None | None | N |
N/D | 0.6967 | likely_pathogenic | 0.7472 | pathogenic | -0.37 | Destabilizing | 0.981 | D | 0.534 | neutral | N | 0.502791128 | None | None | N |
N/E | 0.9078 | likely_pathogenic | 0.9302 | pathogenic | -0.259 | Destabilizing | 0.996 | D | 0.641 | neutral | None | None | None | None | N |
N/F | 0.9324 | likely_pathogenic | 0.949 | pathogenic | -0.671 | Destabilizing | 0.987 | D | 0.717 | prob.delet. | None | None | None | None | N |
N/G | 0.732 | likely_pathogenic | 0.7572 | pathogenic | -1.343 | Destabilizing | 0.957 | D | 0.432 | neutral | None | None | None | None | N |
N/H | 0.3814 | ambiguous | 0.4412 | ambiguous | -0.912 | Destabilizing | 0.994 | D | 0.654 | neutral | D | 0.522924616 | None | None | N |
N/I | 0.7803 | likely_pathogenic | 0.8632 | pathogenic | -0.086 | Destabilizing | 0.967 | D | 0.699 | prob.neutral | N | 0.47859726 | None | None | N |
N/K | 0.8896 | likely_pathogenic | 0.9204 | pathogenic | -0.251 | Destabilizing | 0.983 | D | 0.648 | neutral | N | 0.480229845 | None | None | N |
N/L | 0.7725 | likely_pathogenic | 0.8343 | pathogenic | -0.086 | Destabilizing | 0.95 | D | 0.677 | prob.neutral | None | None | None | None | N |
N/M | 0.7972 | likely_pathogenic | 0.8546 | pathogenic | 0.306 | Stabilizing | 0.999 | D | 0.667 | neutral | None | None | None | None | N |
N/P | 0.9748 | likely_pathogenic | 0.978 | pathogenic | -0.358 | Destabilizing | 0.996 | D | 0.671 | neutral | None | None | None | None | N |
N/Q | 0.8283 | likely_pathogenic | 0.8659 | pathogenic | -0.804 | Destabilizing | 0.996 | D | 0.657 | neutral | None | None | None | None | N |
N/R | 0.8588 | likely_pathogenic | 0.886 | pathogenic | -0.257 | Destabilizing | 0.996 | D | 0.671 | neutral | None | None | None | None | N |
N/S | 0.2445 | likely_benign | 0.2699 | benign | -0.947 | Destabilizing | 0.892 | D | 0.43 | neutral | N | 0.508896526 | None | None | N |
N/T | 0.6204 | likely_pathogenic | 0.7081 | pathogenic | -0.634 | Destabilizing | 0.892 | D | 0.572 | neutral | N | 0.438529577 | None | None | N |
N/V | 0.7524 | likely_pathogenic | 0.836 | pathogenic | -0.358 | Destabilizing | 0.975 | D | 0.713 | prob.delet. | None | None | None | None | N |
N/W | 0.9683 | likely_pathogenic | 0.9731 | pathogenic | -0.396 | Destabilizing | 0.999 | D | 0.693 | prob.neutral | None | None | None | None | N |
N/Y | 0.6237 | likely_pathogenic | 0.6661 | pathogenic | -0.209 | Destabilizing | 0.994 | D | 0.682 | prob.neutral | N | 0.503298107 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.