Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24197 | 72814;72815;72816 | chr2:178573543;178573542;178573541 | chr2:179438270;179438269;179438268 |
N2AB | 22556 | 67891;67892;67893 | chr2:178573543;178573542;178573541 | chr2:179438270;179438269;179438268 |
N2A | 21629 | 65110;65111;65112 | chr2:178573543;178573542;178573541 | chr2:179438270;179438269;179438268 |
N2B | 15132 | 45619;45620;45621 | chr2:178573543;178573542;178573541 | chr2:179438270;179438269;179438268 |
Novex-1 | 15257 | 45994;45995;45996 | chr2:178573543;178573542;178573541 | chr2:179438270;179438269;179438268 |
Novex-2 | 15324 | 46195;46196;46197 | chr2:178573543;178573542;178573541 | chr2:179438270;179438269;179438268 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | None | None | 0.046 | N | 0.281 | 0.267 | 0.603037435086 | gnomAD-4.0.0 | 3.90683E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 4.2244E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.8061 | likely_pathogenic | 0.8731 | pathogenic | -2.726 | Highly Destabilizing | 0.939 | D | 0.583 | neutral | D | 0.574039963 | None | None | N |
V/C | 0.9405 | likely_pathogenic | 0.9639 | pathogenic | -2.211 | Highly Destabilizing | 0.999 | D | 0.805 | deleterious | None | None | None | None | N |
V/D | 0.9975 | likely_pathogenic | 0.9983 | pathogenic | -3.76 | Highly Destabilizing | 0.997 | D | 0.901 | deleterious | D | 0.654557448 | None | None | N |
V/E | 0.9937 | likely_pathogenic | 0.9949 | pathogenic | -3.466 | Highly Destabilizing | 0.998 | D | 0.887 | deleterious | None | None | None | None | N |
V/F | 0.906 | likely_pathogenic | 0.948 | pathogenic | -1.671 | Destabilizing | 0.982 | D | 0.806 | deleterious | D | 0.574039963 | None | None | N |
V/G | 0.8888 | likely_pathogenic | 0.9248 | pathogenic | -3.268 | Highly Destabilizing | 0.997 | D | 0.901 | deleterious | D | 0.654557448 | None | None | N |
V/H | 0.9983 | likely_pathogenic | 0.999 | pathogenic | -3.014 | Highly Destabilizing | 0.999 | D | 0.891 | deleterious | None | None | None | None | N |
V/I | 0.0895 | likely_benign | 0.1076 | benign | -1.127 | Destabilizing | 0.046 | N | 0.281 | neutral | N | 0.518306309 | None | None | N |
V/K | 0.9963 | likely_pathogenic | 0.9967 | pathogenic | -2.475 | Highly Destabilizing | 0.993 | D | 0.891 | deleterious | None | None | None | None | N |
V/L | 0.6355 | likely_pathogenic | 0.7602 | pathogenic | -1.127 | Destabilizing | 0.76 | D | 0.49 | neutral | D | 0.531306859 | None | None | N |
V/M | 0.7317 | likely_pathogenic | 0.8393 | pathogenic | -1.32 | Destabilizing | 0.986 | D | 0.696 | prob.neutral | None | None | None | None | N |
V/N | 0.9908 | likely_pathogenic | 0.9938 | pathogenic | -3.12 | Highly Destabilizing | 0.998 | D | 0.908 | deleterious | None | None | None | None | N |
V/P | 0.9952 | likely_pathogenic | 0.9965 | pathogenic | -1.647 | Destabilizing | 0.998 | D | 0.894 | deleterious | None | None | None | None | N |
V/Q | 0.9933 | likely_pathogenic | 0.9954 | pathogenic | -2.832 | Highly Destabilizing | 0.998 | D | 0.904 | deleterious | None | None | None | None | N |
V/R | 0.9924 | likely_pathogenic | 0.9936 | pathogenic | -2.369 | Highly Destabilizing | 0.998 | D | 0.912 | deleterious | None | None | None | None | N |
V/S | 0.9521 | likely_pathogenic | 0.9706 | pathogenic | -3.587 | Highly Destabilizing | 0.993 | D | 0.885 | deleterious | None | None | None | None | N |
V/T | 0.8923 | likely_pathogenic | 0.9156 | pathogenic | -3.157 | Highly Destabilizing | 0.953 | D | 0.663 | neutral | None | None | None | None | N |
V/W | 0.9986 | likely_pathogenic | 0.9994 | pathogenic | -2.205 | Highly Destabilizing | 0.999 | D | 0.86 | deleterious | None | None | None | None | N |
V/Y | 0.9918 | likely_pathogenic | 0.9958 | pathogenic | -1.963 | Destabilizing | 0.998 | D | 0.809 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.