Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24203 | 72832;72833;72834 | chr2:178573525;178573524;178573523 | chr2:179438252;179438251;179438250 |
N2AB | 22562 | 67909;67910;67911 | chr2:178573525;178573524;178573523 | chr2:179438252;179438251;179438250 |
N2A | 21635 | 65128;65129;65130 | chr2:178573525;178573524;178573523 | chr2:179438252;179438251;179438250 |
N2B | 15138 | 45637;45638;45639 | chr2:178573525;178573524;178573523 | chr2:179438252;179438251;179438250 |
Novex-1 | 15263 | 46012;46013;46014 | chr2:178573525;178573524;178573523 | chr2:179438252;179438251;179438250 |
Novex-2 | 15330 | 46213;46214;46215 | chr2:178573525;178573524;178573523 | chr2:179438252;179438251;179438250 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/F | rs1235190476 | -0.166 | 0.892 | N | 0.535 | 0.267 | 0.427024044652 | gnomAD-2.1.1 | 6.38E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.29719E-04 | 0 |
Y/F | rs1235190476 | -0.166 | 0.892 | N | 0.535 | 0.267 | 0.427024044652 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.9036 | likely_pathogenic | 0.9138 | pathogenic | -0.619 | Destabilizing | 0.916 | D | 0.656 | neutral | None | None | None | None | I |
Y/C | 0.4622 | ambiguous | 0.5381 | ambiguous | 0.135 | Stabilizing | 0.999 | D | 0.697 | prob.neutral | D | 0.524002052 | None | None | I |
Y/D | 0.8816 | likely_pathogenic | 0.8918 | pathogenic | 0.868 | Stabilizing | 0.994 | D | 0.687 | prob.neutral | N | 0.485279076 | None | None | I |
Y/E | 0.9622 | likely_pathogenic | 0.9675 | pathogenic | 0.85 | Stabilizing | 0.987 | D | 0.672 | neutral | None | None | None | None | I |
Y/F | 0.0978 | likely_benign | 0.0922 | benign | -0.311 | Destabilizing | 0.892 | D | 0.535 | neutral | N | 0.47776833 | None | None | I |
Y/G | 0.9161 | likely_pathogenic | 0.9279 | pathogenic | -0.806 | Destabilizing | 0.987 | D | 0.667 | neutral | None | None | None | None | I |
Y/H | 0.5328 | ambiguous | 0.5612 | ambiguous | 0.22 | Stabilizing | 0.994 | D | 0.596 | neutral | N | 0.470252694 | None | None | I |
Y/I | 0.6985 | likely_pathogenic | 0.729 | pathogenic | -0.15 | Destabilizing | 0.95 | D | 0.637 | neutral | None | None | None | None | I |
Y/K | 0.9682 | likely_pathogenic | 0.9735 | pathogenic | 0.224 | Stabilizing | 0.975 | D | 0.665 | neutral | None | None | None | None | I |
Y/L | 0.7836 | likely_pathogenic | 0.8026 | pathogenic | -0.15 | Destabilizing | 0.437 | N | 0.6 | neutral | None | None | None | None | I |
Y/M | 0.8047 | likely_pathogenic | 0.8181 | pathogenic | -0.056 | Destabilizing | 0.693 | D | 0.57 | neutral | None | None | None | None | I |
Y/N | 0.5892 | likely_pathogenic | 0.614 | pathogenic | 0.034 | Stabilizing | 0.983 | D | 0.678 | prob.neutral | N | 0.471542914 | None | None | I |
Y/P | 0.992 | likely_pathogenic | 0.9938 | pathogenic | -0.287 | Destabilizing | 0.996 | D | 0.702 | prob.neutral | None | None | None | None | I |
Y/Q | 0.9261 | likely_pathogenic | 0.9401 | pathogenic | 0.085 | Stabilizing | 0.987 | D | 0.639 | neutral | None | None | None | None | I |
Y/R | 0.9288 | likely_pathogenic | 0.9411 | pathogenic | 0.45 | Stabilizing | 0.987 | D | 0.679 | prob.neutral | None | None | None | None | I |
Y/S | 0.7959 | likely_pathogenic | 0.811 | pathogenic | -0.379 | Destabilizing | 0.967 | D | 0.621 | neutral | N | 0.518921519 | None | None | I |
Y/T | 0.9031 | likely_pathogenic | 0.9187 | pathogenic | -0.304 | Destabilizing | 0.975 | D | 0.65 | neutral | None | None | None | None | I |
Y/V | 0.6569 | likely_pathogenic | 0.6922 | pathogenic | -0.287 | Destabilizing | 0.845 | D | 0.643 | neutral | None | None | None | None | I |
Y/W | 0.5923 | likely_pathogenic | 0.5728 | pathogenic | -0.451 | Destabilizing | 0.999 | D | 0.584 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.