Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24212 | 72859;72860;72861 | chr2:178573498;178573497;178573496 | chr2:179438225;179438224;179438223 |
N2AB | 22571 | 67936;67937;67938 | chr2:178573498;178573497;178573496 | chr2:179438225;179438224;179438223 |
N2A | 21644 | 65155;65156;65157 | chr2:178573498;178573497;178573496 | chr2:179438225;179438224;179438223 |
N2B | 15147 | 45664;45665;45666 | chr2:178573498;178573497;178573496 | chr2:179438225;179438224;179438223 |
Novex-1 | 15272 | 46039;46040;46041 | chr2:178573498;178573497;178573496 | chr2:179438225;179438224;179438223 |
Novex-2 | 15339 | 46240;46241;46242 | chr2:178573498;178573497;178573496 | chr2:179438225;179438224;179438223 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | rs1708983044 | None | 0.501 | N | 0.578 | 0.27 | 0.308904156042 | gnomAD-4.0.0 | 5.8205E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 8.71283E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.0973 | likely_benign | 0.1026 | benign | -0.103 | Destabilizing | 0.172 | N | 0.445 | neutral | D | 0.522017752 | None | None | N |
E/C | 0.6223 | likely_pathogenic | 0.6922 | pathogenic | -0.25 | Destabilizing | 0.991 | D | 0.539 | neutral | None | None | None | None | N |
E/D | 0.0737 | likely_benign | 0.0805 | benign | -0.317 | Destabilizing | 0.001 | N | 0.167 | neutral | N | 0.479363053 | None | None | N |
E/F | 0.5114 | ambiguous | 0.5797 | pathogenic | -0.052 | Destabilizing | 0.824 | D | 0.548 | neutral | None | None | None | None | N |
E/G | 0.0994 | likely_benign | 0.11 | benign | -0.239 | Destabilizing | 0.501 | D | 0.578 | neutral | N | 0.490585449 | None | None | N |
E/H | 0.2816 | likely_benign | 0.3275 | benign | 0.56 | Stabilizing | 0.905 | D | 0.487 | neutral | None | None | None | None | N |
E/I | 0.1895 | likely_benign | 0.2099 | benign | 0.204 | Stabilizing | 0.01 | N | 0.352 | neutral | None | None | None | None | N |
E/K | 0.0815 | likely_benign | 0.0917 | benign | 0.375 | Stabilizing | 0.335 | N | 0.455 | neutral | N | 0.47722768 | None | None | N |
E/L | 0.2007 | likely_benign | 0.2275 | benign | 0.204 | Stabilizing | 0.187 | N | 0.539 | neutral | None | None | None | None | N |
E/M | 0.2626 | likely_benign | 0.2917 | benign | -0.014 | Destabilizing | 0.824 | D | 0.545 | neutral | None | None | None | None | N |
E/N | 0.1406 | likely_benign | 0.1608 | benign | 0.046 | Stabilizing | 0.824 | D | 0.505 | neutral | None | None | None | None | N |
E/P | 0.2401 | likely_benign | 0.2692 | benign | 0.12 | Stabilizing | 0.905 | D | 0.593 | neutral | None | None | None | None | N |
E/Q | 0.0964 | likely_benign | 0.1043 | benign | 0.074 | Stabilizing | 0.03 | N | 0.31 | neutral | N | 0.486457619 | None | None | N |
E/R | 0.1559 | likely_benign | 0.1772 | benign | 0.662 | Stabilizing | 0.7 | D | 0.523 | neutral | None | None | None | None | N |
E/S | 0.1135 | likely_benign | 0.1246 | benign | -0.088 | Destabilizing | 0.4 | N | 0.441 | neutral | None | None | None | None | N |
E/T | 0.1339 | likely_benign | 0.1481 | benign | 0.033 | Stabilizing | 0.571 | D | 0.524 | neutral | None | None | None | None | N |
E/V | 0.1201 | likely_benign | 0.1293 | benign | 0.12 | Stabilizing | 0.003 | N | 0.367 | neutral | N | 0.49007847 | None | None | N |
E/W | 0.7483 | likely_pathogenic | 0.8112 | pathogenic | 0.033 | Stabilizing | 0.991 | D | 0.603 | neutral | None | None | None | None | N |
E/Y | 0.3815 | ambiguous | 0.4397 | ambiguous | 0.179 | Stabilizing | 0.905 | D | 0.562 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.