Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24218 | 72877;72878;72879 | chr2:178573480;178573479;178573478 | chr2:179438207;179438206;179438205 |
N2AB | 22577 | 67954;67955;67956 | chr2:178573480;178573479;178573478 | chr2:179438207;179438206;179438205 |
N2A | 21650 | 65173;65174;65175 | chr2:178573480;178573479;178573478 | chr2:179438207;179438206;179438205 |
N2B | 15153 | 45682;45683;45684 | chr2:178573480;178573479;178573478 | chr2:179438207;179438206;179438205 |
Novex-1 | 15278 | 46057;46058;46059 | chr2:178573480;178573479;178573478 | chr2:179438207;179438206;179438205 |
Novex-2 | 15345 | 46258;46259;46260 | chr2:178573480;178573479;178573478 | chr2:179438207;179438206;179438205 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/K | None | None | 0.115 | N | 0.748 | 0.132 | 0.137902524267 | gnomAD-4.0.0 | 1.47595E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.87968E-06 | 0 | 0 |
N/Y | None | None | 0.186 | N | 0.622 | 0.17 | 0.225902525712 | gnomAD-4.0.0 | 1.47592E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.87965E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.5112 | ambiguous | 0.5003 | ambiguous | -0.142 | Destabilizing | 0.147 | N | 0.604 | neutral | None | None | None | None | I |
N/C | 0.5736 | likely_pathogenic | 0.5631 | ambiguous | 0.309 | Stabilizing | 0.934 | D | 0.761 | deleterious | None | None | None | None | I |
N/D | 0.1042 | likely_benign | 0.1075 | benign | 0.172 | Stabilizing | None | N | 0.319 | neutral | N | 0.434801413 | None | None | I |
N/E | 0.6382 | likely_pathogenic | 0.6399 | pathogenic | 0.111 | Stabilizing | 0.08 | N | 0.713 | prob.delet. | None | None | None | None | I |
N/F | 0.7404 | likely_pathogenic | 0.7374 | pathogenic | -0.705 | Destabilizing | 0.552 | D | 0.644 | neutral | None | None | None | None | I |
N/G | 0.6738 | likely_pathogenic | 0.6593 | pathogenic | -0.25 | Destabilizing | 0.147 | N | 0.715 | prob.delet. | None | None | None | None | I |
N/H | 0.2082 | likely_benign | 0.2241 | benign | -0.335 | Destabilizing | 0.001 | N | 0.462 | neutral | N | 0.511472685 | None | None | I |
N/I | 0.4204 | ambiguous | 0.4126 | ambiguous | 0.044 | Stabilizing | 0.481 | N | 0.664 | prob.neutral | N | 0.467905156 | None | None | I |
N/K | 0.7761 | likely_pathogenic | 0.7783 | pathogenic | 0.214 | Stabilizing | 0.115 | N | 0.748 | deleterious | N | 0.46265169 | None | None | I |
N/L | 0.4039 | ambiguous | 0.4029 | ambiguous | 0.044 | Stabilizing | 0.378 | N | 0.657 | prob.neutral | None | None | None | None | I |
N/M | 0.5292 | ambiguous | 0.5298 | ambiguous | 0.268 | Stabilizing | 0.934 | D | 0.639 | neutral | None | None | None | None | I |
N/P | 0.7036 | likely_pathogenic | 0.6867 | pathogenic | 0.006 | Stabilizing | 0.552 | D | 0.649 | prob.neutral | None | None | None | None | I |
N/Q | 0.6708 | likely_pathogenic | 0.6685 | pathogenic | -0.2 | Destabilizing | 0.378 | N | 0.756 | deleterious | None | None | None | None | I |
N/R | 0.8116 | likely_pathogenic | 0.8164 | pathogenic | 0.247 | Stabilizing | 0.378 | N | 0.758 | deleterious | None | None | None | None | I |
N/S | 0.1259 | likely_benign | 0.1266 | benign | 0.042 | Stabilizing | 0.061 | N | 0.723 | deleterious | N | 0.511299326 | None | None | I |
N/T | 0.294 | likely_benign | 0.2886 | benign | 0.104 | Stabilizing | 0.115 | N | 0.748 | deleterious | N | 0.460683213 | None | None | I |
N/V | 0.4625 | ambiguous | 0.4434 | ambiguous | 0.006 | Stabilizing | 0.552 | D | 0.686 | prob.delet. | None | None | None | None | I |
N/W | 0.9143 | likely_pathogenic | 0.9206 | pathogenic | -0.794 | Destabilizing | 0.934 | D | 0.787 | deleterious | None | None | None | None | I |
N/Y | 0.3368 | likely_benign | 0.3425 | ambiguous | -0.477 | Destabilizing | 0.186 | N | 0.622 | neutral | N | 0.516590503 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.