Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24222 | 72889;72890;72891 | chr2:178573468;178573467;178573466 | chr2:179438195;179438194;179438193 |
N2AB | 22581 | 67966;67967;67968 | chr2:178573468;178573467;178573466 | chr2:179438195;179438194;179438193 |
N2A | 21654 | 65185;65186;65187 | chr2:178573468;178573467;178573466 | chr2:179438195;179438194;179438193 |
N2B | 15157 | 45694;45695;45696 | chr2:178573468;178573467;178573466 | chr2:179438195;179438194;179438193 |
Novex-1 | 15282 | 46069;46070;46071 | chr2:178573468;178573467;178573466 | chr2:179438195;179438194;179438193 |
Novex-2 | 15349 | 46270;46271;46272 | chr2:178573468;178573467;178573466 | chr2:179438195;179438194;179438193 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/R | None | None | 0.049 | N | 0.463 | 0.161 | 0.256793551483 | gnomAD-4.0.0 | 1.91061E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 2.02151E-05 | 0 | 0 | 0 | 0 |
P/S | rs764364289 | 0.035 | 0.961 | N | 0.569 | 0.337 | 0.332133492242 | gnomAD-2.1.1 | 5.85E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.18E-05 | 0 |
P/S | rs764364289 | 0.035 | 0.961 | N | 0.569 | 0.337 | 0.332133492242 | gnomAD-4.0.0 | 2.94393E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.60173E-05 | None | 0 | 1.8875E-04 | 9.38245E-07 | 0 | 1.78591E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.1017 | likely_benign | 0.0957 | benign | -0.286 | Destabilizing | 0.78 | D | 0.583 | neutral | N | 0.470587727 | None | None | I |
P/C | 0.3485 | ambiguous | 0.3152 | benign | -0.538 | Destabilizing | 0.999 | D | 0.811 | deleterious | None | None | None | None | I |
P/D | 0.6487 | likely_pathogenic | 0.6052 | pathogenic | 0.056 | Stabilizing | 0.985 | D | 0.603 | neutral | None | None | None | None | I |
P/E | 0.3599 | ambiguous | 0.3195 | benign | -0.068 | Destabilizing | 0.971 | D | 0.569 | neutral | None | None | None | None | I |
P/F | 0.3796 | ambiguous | 0.3283 | benign | -0.701 | Destabilizing | 0.992 | D | 0.789 | deleterious | None | None | None | None | I |
P/G | 0.4786 | ambiguous | 0.4383 | ambiguous | -0.374 | Destabilizing | 0.985 | D | 0.532 | neutral | None | None | None | None | I |
P/H | 0.2204 | likely_benign | 0.1969 | benign | -0.051 | Destabilizing | 0.998 | D | 0.767 | deleterious | N | 0.496799966 | None | None | I |
P/I | 0.1258 | likely_benign | 0.118 | benign | -0.215 | Destabilizing | 0.943 | D | 0.673 | prob.neutral | None | None | None | None | I |
P/K | 0.218 | likely_benign | 0.2021 | benign | -0.028 | Destabilizing | 0.825 | D | 0.715 | prob.delet. | None | None | None | None | I |
P/L | 0.0816 | likely_benign | 0.0753 | benign | -0.215 | Destabilizing | 0.78 | D | 0.64 | neutral | N | 0.465400395 | None | None | I |
P/M | 0.2025 | likely_benign | 0.1942 | benign | -0.181 | Destabilizing | 0.996 | D | 0.76 | deleterious | None | None | None | None | I |
P/N | 0.4168 | ambiguous | 0.3649 | ambiguous | 0.18 | Stabilizing | 0.985 | D | 0.833 | deleterious | None | None | None | None | I |
P/Q | 0.1768 | likely_benign | 0.1569 | benign | -0.083 | Destabilizing | 0.971 | D | 0.577 | neutral | None | None | None | None | I |
P/R | 0.1765 | likely_benign | 0.1556 | benign | 0.397 | Stabilizing | 0.049 | N | 0.463 | neutral | N | 0.462780275 | None | None | I |
P/S | 0.1836 | likely_benign | 0.1709 | benign | -0.196 | Destabilizing | 0.961 | D | 0.569 | neutral | N | 0.490759578 | None | None | I |
P/T | 0.1078 | likely_benign | 0.1055 | benign | -0.222 | Destabilizing | 0.961 | D | 0.599 | neutral | N | 0.513383284 | None | None | I |
P/V | 0.1076 | likely_benign | 0.1002 | benign | -0.206 | Destabilizing | 0.064 | N | 0.362 | neutral | None | None | None | None | I |
P/W | 0.6858 | likely_pathogenic | 0.619 | pathogenic | -0.756 | Destabilizing | 0.999 | D | 0.773 | deleterious | None | None | None | None | I |
P/Y | 0.4425 | ambiguous | 0.3861 | ambiguous | -0.409 | Destabilizing | 0.985 | D | 0.797 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.