Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24227 | 72904;72905;72906 | chr2:178573453;178573452;178573451 | chr2:179438180;179438179;179438178 |
N2AB | 22586 | 67981;67982;67983 | chr2:178573453;178573452;178573451 | chr2:179438180;179438179;179438178 |
N2A | 21659 | 65200;65201;65202 | chr2:178573453;178573452;178573451 | chr2:179438180;179438179;179438178 |
N2B | 15162 | 45709;45710;45711 | chr2:178573453;178573452;178573451 | chr2:179438180;179438179;179438178 |
Novex-1 | 15287 | 46084;46085;46086 | chr2:178573453;178573452;178573451 | chr2:179438180;179438179;179438178 |
Novex-2 | 15354 | 46285;46286;46287 | chr2:178573453;178573452;178573451 | chr2:179438180;179438179;179438178 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/Q | rs1333523637 | -0.396 | 0.016 | N | 0.19 | 0.064 | 0.219573609325 | gnomAD-2.1.1 | 3.19E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 6.49E-05 | 0 |
K/Q | rs1333523637 | -0.396 | 0.016 | N | 0.19 | 0.064 | 0.219573609325 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
K/Q | rs1333523637 | -0.396 | 0.016 | N | 0.19 | 0.064 | 0.219573609325 | gnomAD-4.0.0 | 2.92786E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.35272E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.2069 | likely_benign | 0.2018 | benign | -0.305 | Destabilizing | 0.25 | N | 0.441 | neutral | None | None | None | None | N |
K/C | 0.4886 | ambiguous | 0.4929 | ambiguous | -0.193 | Destabilizing | 0.992 | D | 0.622 | neutral | None | None | None | None | N |
K/D | 0.489 | ambiguous | 0.476 | ambiguous | -0.207 | Destabilizing | 0.617 | D | 0.561 | neutral | None | None | None | None | N |
K/E | 0.1352 | likely_benign | 0.1274 | benign | -0.128 | Destabilizing | 0.201 | N | 0.486 | neutral | N | 0.405540085 | None | None | N |
K/F | 0.7212 | likely_pathogenic | 0.6866 | pathogenic | -0.026 | Destabilizing | 0.972 | D | 0.619 | neutral | None | None | None | None | N |
K/G | 0.237 | likely_benign | 0.2363 | benign | -0.655 | Destabilizing | 0.002 | N | 0.363 | neutral | None | None | None | None | N |
K/H | 0.3174 | likely_benign | 0.3131 | benign | -1.123 | Destabilizing | 0.92 | D | 0.634 | neutral | None | None | None | None | N |
K/I | 0.3135 | likely_benign | 0.3028 | benign | 0.59 | Stabilizing | 0.896 | D | 0.64 | neutral | N | 0.492084421 | None | None | N |
K/L | 0.2701 | likely_benign | 0.2589 | benign | 0.59 | Stabilizing | 0.617 | D | 0.608 | neutral | None | None | None | None | N |
K/M | 0.195 | likely_benign | 0.1943 | benign | 0.519 | Stabilizing | 0.92 | D | 0.633 | neutral | None | None | None | None | N |
K/N | 0.3541 | ambiguous | 0.3454 | ambiguous | -0.206 | Destabilizing | 0.549 | D | 0.498 | neutral | N | 0.461934873 | None | None | N |
K/P | 0.654 | likely_pathogenic | 0.6122 | pathogenic | 0.322 | Stabilizing | 0.92 | D | 0.653 | neutral | None | None | None | None | N |
K/Q | 0.1038 | likely_benign | 0.1019 | benign | -0.313 | Destabilizing | 0.016 | N | 0.19 | neutral | N | 0.391418782 | None | None | N |
K/R | 0.0815 | likely_benign | 0.0779 | benign | -0.587 | Destabilizing | 0.379 | N | 0.479 | neutral | N | 0.432649329 | None | None | N |
K/S | 0.2607 | likely_benign | 0.2595 | benign | -0.737 | Destabilizing | 0.059 | N | 0.227 | neutral | None | None | None | None | N |
K/T | 0.1381 | likely_benign | 0.1325 | benign | -0.473 | Destabilizing | 0.379 | N | 0.562 | neutral | N | 0.395843167 | None | None | N |
K/V | 0.2331 | likely_benign | 0.2234 | benign | 0.322 | Stabilizing | 0.617 | D | 0.639 | neutral | None | None | None | None | N |
K/W | 0.7233 | likely_pathogenic | 0.7043 | pathogenic | 0.043 | Stabilizing | 0.992 | D | 0.649 | neutral | None | None | None | None | N |
K/Y | 0.5858 | likely_pathogenic | 0.5683 | pathogenic | 0.324 | Stabilizing | 0.92 | D | 0.635 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.