Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24229 | 72910;72911;72912 | chr2:178573447;178573446;178573445 | chr2:179438174;179438173;179438172 |
N2AB | 22588 | 67987;67988;67989 | chr2:178573447;178573446;178573445 | chr2:179438174;179438173;179438172 |
N2A | 21661 | 65206;65207;65208 | chr2:178573447;178573446;178573445 | chr2:179438174;179438173;179438172 |
N2B | 15164 | 45715;45716;45717 | chr2:178573447;178573446;178573445 | chr2:179438174;179438173;179438172 |
Novex-1 | 15289 | 46090;46091;46092 | chr2:178573447;178573446;178573445 | chr2:179438174;179438173;179438172 |
Novex-2 | 15356 | 46291;46292;46293 | chr2:178573447;178573446;178573445 | chr2:179438174;179438173;179438172 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/R | rs1708954278 | None | 0.997 | D | 0.797 | 0.433 | 0.693129305553 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 6.56E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.3392 | likely_benign | 0.3025 | benign | -2.037 | Highly Destabilizing | 0.977 | D | 0.743 | deleterious | N | 0.503057844 | None | None | N |
P/C | 0.814 | likely_pathogenic | 0.7582 | pathogenic | -1.866 | Destabilizing | 1.0 | D | 0.844 | deleterious | None | None | None | None | N |
P/D | 0.9956 | likely_pathogenic | 0.9937 | pathogenic | -3.023 | Highly Destabilizing | 0.999 | D | 0.757 | deleterious | None | None | None | None | N |
P/E | 0.9813 | likely_pathogenic | 0.9721 | pathogenic | -2.822 | Highly Destabilizing | 0.999 | D | 0.765 | deleterious | None | None | None | None | N |
P/F | 0.9632 | likely_pathogenic | 0.9563 | pathogenic | -1.109 | Destabilizing | 0.999 | D | 0.864 | deleterious | None | None | None | None | N |
P/G | 0.9379 | likely_pathogenic | 0.9231 | pathogenic | -2.527 | Highly Destabilizing | 0.999 | D | 0.767 | deleterious | None | None | None | None | N |
P/H | 0.9711 | likely_pathogenic | 0.9564 | pathogenic | -2.295 | Highly Destabilizing | 1.0 | D | 0.83 | deleterious | D | 0.546369925 | None | None | N |
P/I | 0.3975 | ambiguous | 0.352 | ambiguous | -0.671 | Destabilizing | 0.99 | D | 0.804 | deleterious | None | None | None | None | N |
P/K | 0.9862 | likely_pathogenic | 0.9783 | pathogenic | -1.63 | Destabilizing | 0.998 | D | 0.759 | deleterious | None | None | None | None | N |
P/L | 0.2776 | likely_benign | 0.233 | benign | -0.671 | Destabilizing | 0.235 | N | 0.735 | prob.delet. | N | 0.477565181 | None | None | N |
P/M | 0.6825 | likely_pathogenic | 0.6353 | pathogenic | -1.013 | Destabilizing | 0.999 | D | 0.844 | deleterious | None | None | None | None | N |
P/N | 0.9865 | likely_pathogenic | 0.9783 | pathogenic | -1.979 | Destabilizing | 0.999 | D | 0.808 | deleterious | None | None | None | None | N |
P/Q | 0.9563 | likely_pathogenic | 0.9309 | pathogenic | -1.848 | Destabilizing | 0.999 | D | 0.795 | deleterious | None | None | None | None | N |
P/R | 0.9714 | likely_pathogenic | 0.9557 | pathogenic | -1.486 | Destabilizing | 0.997 | D | 0.797 | deleterious | D | 0.546369925 | None | None | N |
P/S | 0.869 | likely_pathogenic | 0.8249 | pathogenic | -2.493 | Highly Destabilizing | 0.997 | D | 0.726 | prob.delet. | D | 0.528012181 | None | None | N |
P/T | 0.5293 | ambiguous | 0.4322 | ambiguous | -2.164 | Highly Destabilizing | 0.997 | D | 0.721 | prob.delet. | D | 0.534506641 | None | None | N |
P/V | 0.266 | likely_benign | 0.2314 | benign | -1.102 | Destabilizing | 0.99 | D | 0.771 | deleterious | None | None | None | None | N |
P/W | 0.9936 | likely_pathogenic | 0.9904 | pathogenic | -1.64 | Destabilizing | 1.0 | D | 0.804 | deleterious | None | None | None | None | N |
P/Y | 0.9862 | likely_pathogenic | 0.9803 | pathogenic | -1.295 | Destabilizing | 0.999 | D | 0.863 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.