Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24230 | 72913;72914;72915 | chr2:178573444;178573443;178573442 | chr2:179438171;179438170;179438169 |
N2AB | 22589 | 67990;67991;67992 | chr2:178573444;178573443;178573442 | chr2:179438171;179438170;179438169 |
N2A | 21662 | 65209;65210;65211 | chr2:178573444;178573443;178573442 | chr2:179438171;179438170;179438169 |
N2B | 15165 | 45718;45719;45720 | chr2:178573444;178573443;178573442 | chr2:179438171;179438170;179438169 |
Novex-1 | 15290 | 46093;46094;46095 | chr2:178573444;178573443;178573442 | chr2:179438171;179438170;179438169 |
Novex-2 | 15357 | 46294;46295;46296 | chr2:178573444;178573443;178573442 | chr2:179438171;179438170;179438169 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | rs771181715 | None | 0.805 | N | 0.614 | 0.324 | 0.43965937752 | gnomAD-2.1.1 | 5.72E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.17E-05 | 0 |
E/A | rs771181715 | None | 0.805 | N | 0.614 | 0.324 | 0.43965937752 | gnomAD-4.0.0 | 1.87812E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.26631E-06 | 0 | 0 |
E/K | None | None | 0.944 | N | 0.557 | 0.364 | 0.39162414616 | gnomAD-4.0.0 | 1.87826E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.26522E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.2059 | likely_benign | 0.2445 | benign | -0.72 | Destabilizing | 0.805 | D | 0.614 | neutral | N | 0.486257036 | None | None | N |
E/C | 0.8304 | likely_pathogenic | 0.877 | pathogenic | -0.343 | Destabilizing | 0.999 | D | 0.797 | deleterious | None | None | None | None | N |
E/D | 0.1566 | likely_benign | 0.1842 | benign | -0.809 | Destabilizing | 0.981 | D | 0.501 | neutral | N | 0.494410564 | None | None | N |
E/F | 0.7687 | likely_pathogenic | 0.8188 | pathogenic | -0.295 | Destabilizing | 0.975 | D | 0.792 | deleterious | None | None | None | None | N |
E/G | 0.3731 | ambiguous | 0.3988 | ambiguous | -1.028 | Destabilizing | 0.983 | D | 0.69 | prob.neutral | N | 0.506438432 | None | None | N |
E/H | 0.5049 | ambiguous | 0.5735 | pathogenic | -0.422 | Destabilizing | 0.999 | D | 0.661 | neutral | None | None | None | None | N |
E/I | 0.3028 | likely_benign | 0.359 | ambiguous | 0.104 | Stabilizing | 0.95 | D | 0.717 | prob.delet. | None | None | None | None | N |
E/K | 0.2131 | likely_benign | 0.2355 | benign | -0.405 | Destabilizing | 0.944 | D | 0.557 | neutral | N | 0.481517924 | None | None | N |
E/L | 0.4309 | ambiguous | 0.5098 | ambiguous | 0.104 | Stabilizing | 0.845 | D | 0.689 | prob.neutral | None | None | None | None | N |
E/M | 0.4393 | ambiguous | 0.5064 | ambiguous | 0.399 | Stabilizing | 0.997 | D | 0.775 | deleterious | None | None | None | None | N |
E/N | 0.3145 | likely_benign | 0.3821 | ambiguous | -0.769 | Destabilizing | 0.996 | D | 0.666 | neutral | None | None | None | None | N |
E/P | 0.9501 | likely_pathogenic | 0.9667 | pathogenic | -0.15 | Destabilizing | 0.996 | D | 0.783 | deleterious | None | None | None | None | N |
E/Q | 0.1683 | likely_benign | 0.191 | benign | -0.661 | Destabilizing | 0.994 | D | 0.643 | neutral | N | 0.518113442 | None | None | N |
E/R | 0.3453 | ambiguous | 0.3816 | ambiguous | -0.107 | Destabilizing | 0.987 | D | 0.674 | neutral | None | None | None | None | N |
E/S | 0.246 | likely_benign | 0.2904 | benign | -1.014 | Destabilizing | 0.957 | D | 0.598 | neutral | None | None | None | None | N |
E/T | 0.2201 | likely_benign | 0.2637 | benign | -0.766 | Destabilizing | 0.975 | D | 0.763 | deleterious | None | None | None | None | N |
E/V | 0.1779 | likely_benign | 0.2143 | benign | -0.15 | Destabilizing | 0.056 | N | 0.465 | neutral | N | 0.46707637 | None | None | N |
E/W | 0.9212 | likely_pathogenic | 0.9393 | pathogenic | -0.071 | Destabilizing | 0.999 | D | 0.795 | deleterious | None | None | None | None | N |
E/Y | 0.6658 | likely_pathogenic | 0.7264 | pathogenic | -0.061 | Destabilizing | 0.987 | D | 0.788 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.