Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24231 | 72916;72917;72918 | chr2:178573441;178573440;178573439 | chr2:179438168;179438167;179438166 |
N2AB | 22590 | 67993;67994;67995 | chr2:178573441;178573440;178573439 | chr2:179438168;179438167;179438166 |
N2A | 21663 | 65212;65213;65214 | chr2:178573441;178573440;178573439 | chr2:179438168;179438167;179438166 |
N2B | 15166 | 45721;45722;45723 | chr2:178573441;178573440;178573439 | chr2:179438168;179438167;179438166 |
Novex-1 | 15291 | 46096;46097;46098 | chr2:178573441;178573440;178573439 | chr2:179438168;179438167;179438166 |
Novex-2 | 15358 | 46297;46298;46299 | chr2:178573441;178573440;178573439 | chr2:179438168;179438167;179438166 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/L | None | None | 0.898 | N | 0.501 | 0.27 | 0.429552544315 | gnomAD-4.0.0 | 7.32387E-07 | None | None | None | None | N | None | 3.306E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
V/M | None | None | 0.993 | N | 0.803 | 0.41 | 0.519946186488 | gnomAD-4.0.0 | 7.32387E-07 | None | None | None | None | N | None | 3.306E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.4408 | ambiguous | 0.3878 | ambiguous | -1.68 | Destabilizing | 0.977 | D | 0.542 | neutral | N | 0.509419388 | None | None | N |
V/C | 0.9171 | likely_pathogenic | 0.9013 | pathogenic | -1.089 | Destabilizing | 1.0 | D | 0.818 | deleterious | None | None | None | None | N |
V/D | 0.9836 | likely_pathogenic | 0.975 | pathogenic | -2.021 | Highly Destabilizing | 0.999 | D | 0.897 | deleterious | None | None | None | None | N |
V/E | 0.9744 | likely_pathogenic | 0.9618 | pathogenic | -1.819 | Destabilizing | 0.999 | D | 0.891 | deleterious | N | 0.512802124 | None | None | N |
V/F | 0.775 | likely_pathogenic | 0.704 | pathogenic | -1.012 | Destabilizing | 0.995 | D | 0.873 | deleterious | None | None | None | None | N |
V/G | 0.7404 | likely_pathogenic | 0.6827 | pathogenic | -2.202 | Highly Destabilizing | 0.999 | D | 0.889 | deleterious | D | 0.545857082 | None | None | N |
V/H | 0.9938 | likely_pathogenic | 0.9894 | pathogenic | -1.954 | Destabilizing | 1.0 | D | 0.891 | deleterious | None | None | None | None | N |
V/I | 0.0973 | likely_benign | 0.0935 | benign | -0.243 | Destabilizing | 0.15 | N | 0.307 | neutral | None | None | None | None | N |
V/K | 0.9878 | likely_pathogenic | 0.9802 | pathogenic | -1.264 | Destabilizing | 0.998 | D | 0.895 | deleterious | None | None | None | None | N |
V/L | 0.7085 | likely_pathogenic | 0.6397 | pathogenic | -0.243 | Destabilizing | 0.898 | D | 0.501 | neutral | N | 0.477475305 | None | None | N |
V/M | 0.6296 | likely_pathogenic | 0.5453 | ambiguous | -0.218 | Destabilizing | 0.993 | D | 0.803 | deleterious | N | 0.509813156 | None | None | N |
V/N | 0.9522 | likely_pathogenic | 0.9262 | pathogenic | -1.515 | Destabilizing | 0.999 | D | 0.911 | deleterious | None | None | None | None | N |
V/P | 0.8141 | likely_pathogenic | 0.7776 | pathogenic | -0.692 | Destabilizing | 0.999 | D | 0.903 | deleterious | None | None | None | None | N |
V/Q | 0.9838 | likely_pathogenic | 0.9734 | pathogenic | -1.378 | Destabilizing | 0.999 | D | 0.907 | deleterious | None | None | None | None | N |
V/R | 0.9798 | likely_pathogenic | 0.9689 | pathogenic | -1.151 | Destabilizing | 0.999 | D | 0.91 | deleterious | None | None | None | None | N |
V/S | 0.8415 | likely_pathogenic | 0.7841 | pathogenic | -2.143 | Highly Destabilizing | 0.998 | D | 0.887 | deleterious | None | None | None | None | N |
V/T | 0.7753 | likely_pathogenic | 0.7166 | pathogenic | -1.79 | Destabilizing | 0.983 | D | 0.695 | prob.neutral | None | None | None | None | N |
V/W | 0.996 | likely_pathogenic | 0.9925 | pathogenic | -1.509 | Destabilizing | 1.0 | D | 0.859 | deleterious | None | None | None | None | N |
V/Y | 0.9715 | likely_pathogenic | 0.9553 | pathogenic | -1.063 | Destabilizing | 0.999 | D | 0.873 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.