Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24235 | 72928;72929;72930 | chr2:178573429;178573428;178573427 | chr2:179438156;179438155;179438154 |
N2AB | 22594 | 68005;68006;68007 | chr2:178573429;178573428;178573427 | chr2:179438156;179438155;179438154 |
N2A | 21667 | 65224;65225;65226 | chr2:178573429;178573428;178573427 | chr2:179438156;179438155;179438154 |
N2B | 15170 | 45733;45734;45735 | chr2:178573429;178573428;178573427 | chr2:179438156;179438155;179438154 |
Novex-1 | 15295 | 46108;46109;46110 | chr2:178573429;178573428;178573427 | chr2:179438156;179438155;179438154 |
Novex-2 | 15362 | 46309;46310;46311 | chr2:178573429;178573428;178573427 | chr2:179438156;179438155;179438154 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs1477680606 | None | 0.997 | D | 0.736 | 0.48 | 0.591526896791 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
T/I | rs1477680606 | None | 0.997 | D | 0.736 | 0.48 | 0.591526896791 | gnomAD-4.0.0 | 1.97551E-06 | None | None | None | None | N | None | 2.78963E-05 | 2.26552E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
T/N | rs1477680606 | None | 0.235 | N | 0.275 | 0.306 | 0.341460817117 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1475 | likely_benign | 0.1468 | benign | -0.452 | Destabilizing | 0.977 | D | 0.421 | neutral | D | 0.523236834 | None | None | N |
T/C | 0.5251 | ambiguous | 0.5311 | ambiguous | -0.54 | Destabilizing | 1.0 | D | 0.69 | prob.neutral | None | None | None | None | N |
T/D | 0.6395 | likely_pathogenic | 0.6941 | pathogenic | -1.724 | Destabilizing | 0.99 | D | 0.67 | neutral | None | None | None | None | N |
T/E | 0.6426 | likely_pathogenic | 0.6777 | pathogenic | -1.693 | Destabilizing | 0.995 | D | 0.671 | neutral | None | None | None | None | N |
T/F | 0.5835 | likely_pathogenic | 0.5335 | ambiguous | -0.686 | Destabilizing | 0.999 | D | 0.772 | deleterious | None | None | None | None | N |
T/G | 0.2277 | likely_benign | 0.2306 | benign | -0.717 | Destabilizing | 0.966 | D | 0.597 | neutral | None | None | None | None | N |
T/H | 0.4069 | ambiguous | 0.4318 | ambiguous | -1.194 | Destabilizing | 0.999 | D | 0.75 | deleterious | None | None | None | None | N |
T/I | 0.73 | likely_pathogenic | 0.6818 | pathogenic | 0.167 | Stabilizing | 0.997 | D | 0.736 | prob.delet. | D | 0.528727105 | None | None | N |
T/K | 0.4062 | ambiguous | 0.429 | ambiguous | -0.753 | Destabilizing | 0.995 | D | 0.677 | prob.neutral | None | None | None | None | N |
T/L | 0.221 | likely_benign | 0.2113 | benign | 0.167 | Stabilizing | 0.991 | D | 0.604 | neutral | None | None | None | None | N |
T/M | 0.153 | likely_benign | 0.1397 | benign | 0.559 | Stabilizing | 1.0 | D | 0.707 | prob.neutral | None | None | None | None | N |
T/N | 0.1646 | likely_benign | 0.2088 | benign | -1.122 | Destabilizing | 0.235 | N | 0.275 | neutral | N | 0.475220353 | None | None | N |
T/P | 0.8208 | likely_pathogenic | 0.7984 | pathogenic | -0.007 | Destabilizing | 0.999 | D | 0.723 | prob.delet. | N | 0.521979155 | None | None | N |
T/Q | 0.3341 | likely_benign | 0.3474 | ambiguous | -1.322 | Destabilizing | 0.998 | D | 0.726 | prob.delet. | None | None | None | None | N |
T/R | 0.3253 | likely_benign | 0.3487 | ambiguous | -0.515 | Destabilizing | 0.995 | D | 0.738 | prob.delet. | None | None | None | None | N |
T/S | 0.1214 | likely_benign | 0.1179 | benign | -1.085 | Destabilizing | 0.955 | D | 0.414 | neutral | N | 0.463263024 | None | None | N |
T/V | 0.5179 | ambiguous | 0.479 | ambiguous | -0.007 | Destabilizing | 0.991 | D | 0.548 | neutral | None | None | None | None | N |
T/W | 0.8622 | likely_pathogenic | 0.8384 | pathogenic | -0.821 | Destabilizing | 1.0 | D | 0.737 | prob.delet. | None | None | None | None | N |
T/Y | 0.5939 | likely_pathogenic | 0.5852 | pathogenic | -0.442 | Destabilizing | 0.999 | D | 0.771 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.