Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24236 | 72931;72932;72933 | chr2:178573426;178573425;178573424 | chr2:179438153;179438152;179438151 |
N2AB | 22595 | 68008;68009;68010 | chr2:178573426;178573425;178573424 | chr2:179438153;179438152;179438151 |
N2A | 21668 | 65227;65228;65229 | chr2:178573426;178573425;178573424 | chr2:179438153;179438152;179438151 |
N2B | 15171 | 45736;45737;45738 | chr2:178573426;178573425;178573424 | chr2:179438153;179438152;179438151 |
Novex-1 | 15296 | 46111;46112;46113 | chr2:178573426;178573425;178573424 | chr2:179438153;179438152;179438151 |
Novex-2 | 15363 | 46312;46313;46314 | chr2:178573426;178573425;178573424 | chr2:179438153;179438152;179438151 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/I | None | None | 0.983 | N | 0.723 | 0.461 | 0.555039636665 | gnomAD-4.0.0 | 3.65921E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.74383E-06 | 0 | 1.77658E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.6215 | likely_pathogenic | 0.5865 | pathogenic | -0.221 | Destabilizing | 0.916 | D | 0.535 | neutral | None | None | None | None | N |
K/C | 0.8573 | likely_pathogenic | 0.8213 | pathogenic | -0.384 | Destabilizing | 0.999 | D | 0.749 | deleterious | None | None | None | None | N |
K/D | 0.9332 | likely_pathogenic | 0.9122 | pathogenic | -0.657 | Destabilizing | 0.845 | D | 0.529 | neutral | None | None | None | None | N |
K/E | 0.5628 | ambiguous | 0.5011 | ambiguous | -0.648 | Destabilizing | 0.025 | N | 0.275 | neutral | N | 0.50118112 | None | None | N |
K/F | 0.9791 | likely_pathogenic | 0.9707 | pathogenic | -0.606 | Destabilizing | 0.996 | D | 0.714 | prob.delet. | None | None | None | None | N |
K/G | 0.6208 | likely_pathogenic | 0.5695 | pathogenic | -0.454 | Destabilizing | 0.916 | D | 0.577 | neutral | None | None | None | None | N |
K/H | 0.6045 | likely_pathogenic | 0.5702 | pathogenic | -0.998 | Destabilizing | 0.987 | D | 0.569 | neutral | None | None | None | None | N |
K/I | 0.909 | likely_pathogenic | 0.881 | pathogenic | 0.325 | Stabilizing | 0.983 | D | 0.723 | prob.delet. | N | 0.506362754 | None | None | N |
K/L | 0.8561 | likely_pathogenic | 0.8208 | pathogenic | 0.325 | Stabilizing | 0.975 | D | 0.559 | neutral | None | None | None | None | N |
K/M | 0.6995 | likely_pathogenic | 0.6442 | pathogenic | 0.542 | Stabilizing | 0.999 | D | 0.573 | neutral | None | None | None | None | N |
K/N | 0.8662 | likely_pathogenic | 0.821 | pathogenic | -0.195 | Destabilizing | 0.204 | N | 0.301 | neutral | N | 0.478824296 | None | None | N |
K/P | 0.9355 | likely_pathogenic | 0.9285 | pathogenic | 0.171 | Stabilizing | 0.987 | D | 0.577 | neutral | None | None | None | None | N |
K/Q | 0.3097 | likely_benign | 0.2696 | benign | -0.543 | Destabilizing | 0.935 | D | 0.521 | neutral | N | 0.472267384 | None | None | N |
K/R | 0.0809 | likely_benign | 0.0763 | benign | -0.183 | Destabilizing | 0.892 | D | 0.481 | neutral | N | 0.476498893 | None | None | N |
K/S | 0.7354 | likely_pathogenic | 0.6885 | pathogenic | -0.662 | Destabilizing | 0.916 | D | 0.477 | neutral | None | None | None | None | N |
K/T | 0.6705 | likely_pathogenic | 0.6129 | pathogenic | -0.504 | Destabilizing | 0.892 | D | 0.55 | neutral | N | 0.484064535 | None | None | N |
K/V | 0.8441 | likely_pathogenic | 0.7994 | pathogenic | 0.171 | Stabilizing | 0.987 | D | 0.581 | neutral | None | None | None | None | N |
K/W | 0.9482 | likely_pathogenic | 0.9336 | pathogenic | -0.563 | Destabilizing | 0.999 | D | 0.746 | deleterious | None | None | None | None | N |
K/Y | 0.9315 | likely_pathogenic | 0.9166 | pathogenic | -0.14 | Destabilizing | 0.996 | D | 0.683 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.