Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24241 | 72946;72947;72948 | chr2:178573411;178573410;178573409 | chr2:179438138;179438137;179438136 |
N2AB | 22600 | 68023;68024;68025 | chr2:178573411;178573410;178573409 | chr2:179438138;179438137;179438136 |
N2A | 21673 | 65242;65243;65244 | chr2:178573411;178573410;178573409 | chr2:179438138;179438137;179438136 |
N2B | 15176 | 45751;45752;45753 | chr2:178573411;178573410;178573409 | chr2:179438138;179438137;179438136 |
Novex-1 | 15301 | 46126;46127;46128 | chr2:178573411;178573410;178573409 | chr2:179438138;179438137;179438136 |
Novex-2 | 15368 | 46327;46328;46329 | chr2:178573411;178573410;178573409 | chr2:179438138;179438137;179438136 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | rs756997225 | -0.232 | 0.997 | N | 0.53 | 0.254 | 0.649348744143 | gnomAD-2.1.1 | 5.68E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 5.77E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.7417 | likely_pathogenic | 0.7657 | pathogenic | -2.185 | Highly Destabilizing | 0.999 | D | 0.601 | neutral | N | 0.506860187 | None | None | N |
V/C | 0.9343 | likely_pathogenic | 0.9304 | pathogenic | -1.567 | Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | N |
V/D | 0.9977 | likely_pathogenic | 0.9972 | pathogenic | -3.32 | Highly Destabilizing | 1.0 | D | 0.916 | deleterious | D | 0.534372191 | None | None | N |
V/E | 0.9931 | likely_pathogenic | 0.992 | pathogenic | -3.004 | Highly Destabilizing | 1.0 | D | 0.907 | deleterious | None | None | None | None | N |
V/F | 0.7514 | likely_pathogenic | 0.7262 | pathogenic | -1.273 | Destabilizing | 1.0 | D | 0.797 | deleterious | N | 0.500668442 | None | None | N |
V/G | 0.9209 | likely_pathogenic | 0.9145 | pathogenic | -2.778 | Highly Destabilizing | 1.0 | D | 0.912 | deleterious | D | 0.534372191 | None | None | N |
V/H | 0.997 | likely_pathogenic | 0.9962 | pathogenic | -2.828 | Highly Destabilizing | 1.0 | D | 0.911 | deleterious | None | None | None | None | N |
V/I | 0.0729 | likely_benign | 0.0713 | benign | -0.461 | Destabilizing | 0.997 | D | 0.53 | neutral | N | 0.464684389 | None | None | N |
V/K | 0.995 | likely_pathogenic | 0.9938 | pathogenic | -1.846 | Destabilizing | 1.0 | D | 0.907 | deleterious | None | None | None | None | N |
V/L | 0.1851 | likely_benign | 0.2033 | benign | -0.461 | Destabilizing | 0.997 | D | 0.621 | neutral | N | 0.401432626 | None | None | N |
V/M | 0.4585 | ambiguous | 0.4518 | ambiguous | -0.679 | Destabilizing | 1.0 | D | 0.696 | prob.neutral | None | None | None | None | N |
V/N | 0.9905 | likely_pathogenic | 0.9885 | pathogenic | -2.54 | Highly Destabilizing | 1.0 | D | 0.933 | deleterious | None | None | None | None | N |
V/P | 0.9907 | likely_pathogenic | 0.9901 | pathogenic | -1.018 | Destabilizing | 1.0 | D | 0.905 | deleterious | None | None | None | None | N |
V/Q | 0.9905 | likely_pathogenic | 0.9887 | pathogenic | -2.173 | Highly Destabilizing | 1.0 | D | 0.929 | deleterious | None | None | None | None | N |
V/R | 0.9904 | likely_pathogenic | 0.9881 | pathogenic | -1.978 | Destabilizing | 1.0 | D | 0.936 | deleterious | None | None | None | None | N |
V/S | 0.954 | likely_pathogenic | 0.951 | pathogenic | -2.987 | Highly Destabilizing | 1.0 | D | 0.899 | deleterious | None | None | None | None | N |
V/T | 0.8764 | likely_pathogenic | 0.8739 | pathogenic | -2.519 | Highly Destabilizing | 0.999 | D | 0.62 | neutral | None | None | None | None | N |
V/W | 0.9964 | likely_pathogenic | 0.9953 | pathogenic | -1.924 | Destabilizing | 1.0 | D | 0.892 | deleterious | None | None | None | None | N |
V/Y | 0.9847 | likely_pathogenic | 0.9804 | pathogenic | -1.551 | Destabilizing | 1.0 | D | 0.803 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.