Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24242 | 72949;72950;72951 | chr2:178573408;178573407;178573406 | chr2:179438135;179438134;179438133 |
N2AB | 22601 | 68026;68027;68028 | chr2:178573408;178573407;178573406 | chr2:179438135;179438134;179438133 |
N2A | 21674 | 65245;65246;65247 | chr2:178573408;178573407;178573406 | chr2:179438135;179438134;179438133 |
N2B | 15177 | 45754;45755;45756 | chr2:178573408;178573407;178573406 | chr2:179438135;179438134;179438133 |
Novex-1 | 15302 | 46129;46130;46131 | chr2:178573408;178573407;178573406 | chr2:179438135;179438134;179438133 |
Novex-2 | 15369 | 46330;46331;46332 | chr2:178573408;178573407;178573406 | chr2:179438135;179438134;179438133 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/S | None | None | 0.058 | N | 0.399 | 0.249 | 0.424430313326 | gnomAD-4.0.0 | 1.86391E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.25203E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/A | 0.34 | ambiguous | 0.3733 | ambiguous | -1.56 | Destabilizing | 0.559 | D | 0.395 | neutral | None | None | None | None | N |
C/D | 0.7897 | likely_pathogenic | 0.8171 | pathogenic | -1.042 | Destabilizing | 0.956 | D | 0.717 | prob.delet. | None | None | None | None | N |
C/E | 0.8069 | likely_pathogenic | 0.8323 | pathogenic | -0.86 | Destabilizing | 0.956 | D | 0.748 | deleterious | None | None | None | None | N |
C/F | 0.2484 | likely_benign | 0.2492 | benign | -0.908 | Destabilizing | 0.97 | D | 0.749 | deleterious | N | 0.47446943 | None | None | N |
C/G | 0.2172 | likely_benign | 0.2161 | benign | -1.9 | Destabilizing | 0.698 | D | 0.625 | neutral | N | 0.471341003 | None | None | N |
C/H | 0.5198 | ambiguous | 0.5425 | ambiguous | -2.112 | Highly Destabilizing | 0.998 | D | 0.793 | deleterious | None | None | None | None | N |
C/I | 0.4397 | ambiguous | 0.4417 | ambiguous | -0.658 | Destabilizing | 0.978 | D | 0.548 | neutral | None | None | None | None | N |
C/K | 0.8204 | likely_pathogenic | 0.8319 | pathogenic | -1.18 | Destabilizing | 0.956 | D | 0.7 | prob.neutral | None | None | None | None | N |
C/L | 0.4073 | ambiguous | 0.437 | ambiguous | -0.658 | Destabilizing | 0.86 | D | 0.473 | neutral | None | None | None | None | N |
C/M | 0.4879 | ambiguous | 0.5278 | ambiguous | 0.297 | Stabilizing | 0.998 | D | 0.647 | neutral | None | None | None | None | N |
C/N | 0.4259 | ambiguous | 0.4564 | ambiguous | -1.528 | Destabilizing | 0.956 | D | 0.748 | deleterious | None | None | None | None | N |
C/P | 0.987 | likely_pathogenic | 0.9883 | pathogenic | -0.934 | Destabilizing | 0.978 | D | 0.794 | deleterious | None | None | None | None | N |
C/Q | 0.5877 | likely_pathogenic | 0.6151 | pathogenic | -1.192 | Destabilizing | 0.956 | D | 0.811 | deleterious | None | None | None | None | N |
C/R | 0.528 | ambiguous | 0.5346 | ambiguous | -1.351 | Destabilizing | 0.942 | D | 0.803 | deleterious | N | 0.465913753 | None | None | N |
C/S | 0.1821 | likely_benign | 0.196 | benign | -1.9 | Destabilizing | 0.058 | N | 0.399 | neutral | N | 0.381214857 | None | None | N |
C/T | 0.2638 | likely_benign | 0.2855 | benign | -1.539 | Destabilizing | 0.754 | D | 0.485 | neutral | None | None | None | None | N |
C/V | 0.3497 | ambiguous | 0.3627 | ambiguous | -0.934 | Destabilizing | 0.86 | D | 0.511 | neutral | None | None | None | None | N |
C/W | 0.624 | likely_pathogenic | 0.6442 | pathogenic | -1.202 | Destabilizing | 0.997 | D | 0.745 | deleterious | N | 0.467632575 | None | None | N |
C/Y | 0.3801 | ambiguous | 0.382 | ambiguous | -1.055 | Destabilizing | 0.99 | D | 0.758 | deleterious | N | 0.47421594 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.