Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24244 | 72955;72956;72957 | chr2:178573402;178573401;178573400 | chr2:179438129;179438128;179438127 |
N2AB | 22603 | 68032;68033;68034 | chr2:178573402;178573401;178573400 | chr2:179438129;179438128;179438127 |
N2A | 21676 | 65251;65252;65253 | chr2:178573402;178573401;178573400 | chr2:179438129;179438128;179438127 |
N2B | 15179 | 45760;45761;45762 | chr2:178573402;178573401;178573400 | chr2:179438129;179438128;179438127 |
Novex-1 | 15304 | 46135;46136;46137 | chr2:178573402;178573401;178573400 | chr2:179438129;179438128;179438127 |
Novex-2 | 15371 | 46336;46337;46338 | chr2:178573402;178573401;178573400 | chr2:179438129;179438128;179438127 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/R | rs1708937897 | None | 0.317 | N | 0.572 | 0.18 | 0.430126000877 | gnomAD-4.0.0 | 7.2976E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.35069E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.1064 | likely_benign | 0.1118 | benign | -0.639 | Destabilizing | 0.027 | N | 0.455 | neutral | N | 0.388013117 | None | None | N |
G/C | 0.1606 | likely_benign | 0.17 | benign | -0.676 | Destabilizing | 0.935 | D | 0.633 | neutral | None | None | None | None | N |
G/D | 0.1792 | likely_benign | 0.2086 | benign | -2.272 | Highly Destabilizing | 0.001 | N | 0.359 | neutral | None | None | None | None | N |
G/E | 0.1505 | likely_benign | 0.1806 | benign | -2.107 | Highly Destabilizing | 0.002 | N | 0.373 | neutral | N | 0.369328569 | None | None | N |
G/F | 0.5253 | ambiguous | 0.5402 | ambiguous | -0.691 | Destabilizing | 0.555 | D | 0.623 | neutral | None | None | None | None | N |
G/H | 0.3498 | ambiguous | 0.3834 | ambiguous | -1.89 | Destabilizing | 0.824 | D | 0.571 | neutral | None | None | None | None | N |
G/I | 0.2588 | likely_benign | 0.2858 | benign | 0.373 | Stabilizing | 0.38 | N | 0.62 | neutral | None | None | None | None | N |
G/K | 0.3594 | ambiguous | 0.4104 | ambiguous | -1.228 | Destabilizing | 0.149 | N | 0.534 | neutral | None | None | None | None | N |
G/L | 0.3169 | likely_benign | 0.3417 | ambiguous | 0.373 | Stabilizing | 0.235 | N | 0.586 | neutral | None | None | None | None | N |
G/M | 0.3756 | ambiguous | 0.4066 | ambiguous | 0.28 | Stabilizing | 0.935 | D | 0.607 | neutral | None | None | None | None | N |
G/N | 0.1963 | likely_benign | 0.2221 | benign | -1.37 | Destabilizing | 0.081 | N | 0.534 | neutral | None | None | None | None | N |
G/P | 0.7839 | likely_pathogenic | 0.7775 | pathogenic | 0.078 | Stabilizing | 0.555 | D | 0.568 | neutral | None | None | None | None | N |
G/Q | 0.2539 | likely_benign | 0.2844 | benign | -1.243 | Destabilizing | 0.38 | N | 0.571 | neutral | None | None | None | None | N |
G/R | 0.2901 | likely_benign | 0.3317 | benign | -1.297 | Destabilizing | 0.317 | N | 0.572 | neutral | N | 0.423664486 | None | None | N |
G/S | 0.0828 | likely_benign | 0.0902 | benign | -1.608 | Destabilizing | 0.002 | N | 0.391 | neutral | None | None | None | None | N |
G/T | 0.1303 | likely_benign | 0.1474 | benign | -1.341 | Destabilizing | 0.001 | N | 0.403 | neutral | None | None | None | None | N |
G/V | 0.1757 | likely_benign | 0.1914 | benign | 0.078 | Stabilizing | 0.188 | N | 0.587 | neutral | N | 0.431361249 | None | None | N |
G/W | 0.4138 | ambiguous | 0.4371 | ambiguous | -1.569 | Destabilizing | 0.935 | D | 0.634 | neutral | None | None | None | None | N |
G/Y | 0.3678 | ambiguous | 0.3852 | ambiguous | -0.892 | Destabilizing | 0.791 | D | 0.621 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.