Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24252 | 72979;72980;72981 | chr2:178573378;178573377;178573376 | chr2:179438105;179438104;179438103 |
N2AB | 22611 | 68056;68057;68058 | chr2:178573378;178573377;178573376 | chr2:179438105;179438104;179438103 |
N2A | 21684 | 65275;65276;65277 | chr2:178573378;178573377;178573376 | chr2:179438105;179438104;179438103 |
N2B | 15187 | 45784;45785;45786 | chr2:178573378;178573377;178573376 | chr2:179438105;179438104;179438103 |
Novex-1 | 15312 | 46159;46160;46161 | chr2:178573378;178573377;178573376 | chr2:179438105;179438104;179438103 |
Novex-2 | 15379 | 46360;46361;46362 | chr2:178573378;178573377;178573376 | chr2:179438105;179438104;179438103 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/T | None | None | 0.999 | N | 0.598 | 0.377 | 0.304108284078 | gnomAD-4.0.0 | 7.28603E-07 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.35046E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1259 | likely_benign | 0.1296 | benign | -0.528 | Destabilizing | 0.998 | D | 0.591 | neutral | None | None | None | None | I |
S/C | 0.1004 | likely_benign | 0.1085 | benign | -0.306 | Destabilizing | 1.0 | D | 0.761 | deleterious | N | 0.494262887 | None | None | I |
S/D | 0.7591 | likely_pathogenic | 0.7701 | pathogenic | -0.321 | Destabilizing | 0.999 | D | 0.761 | deleterious | None | None | None | None | I |
S/E | 0.8281 | likely_pathogenic | 0.8369 | pathogenic | -0.399 | Destabilizing | 0.999 | D | 0.735 | prob.delet. | None | None | None | None | I |
S/F | 0.5082 | ambiguous | 0.546 | ambiguous | -1.047 | Destabilizing | 1.0 | D | 0.813 | deleterious | None | None | None | None | I |
S/G | 0.207 | likely_benign | 0.186 | benign | -0.674 | Destabilizing | 0.999 | D | 0.589 | neutral | N | 0.489581036 | None | None | I |
S/H | 0.5578 | ambiguous | 0.5894 | pathogenic | -1.257 | Destabilizing | 1.0 | D | 0.769 | deleterious | None | None | None | None | I |
S/I | 0.4614 | ambiguous | 0.5142 | ambiguous | -0.264 | Destabilizing | 1.0 | D | 0.811 | deleterious | N | 0.507478844 | None | None | I |
S/K | 0.8653 | likely_pathogenic | 0.8819 | pathogenic | -0.615 | Destabilizing | 0.999 | D | 0.748 | deleterious | None | None | None | None | I |
S/L | 0.2097 | likely_benign | 0.2228 | benign | -0.264 | Destabilizing | 1.0 | D | 0.788 | deleterious | None | None | None | None | I |
S/M | 0.341 | ambiguous | 0.3529 | ambiguous | 0.203 | Stabilizing | 1.0 | D | 0.769 | deleterious | None | None | None | None | I |
S/N | 0.2168 | likely_benign | 0.2185 | benign | -0.393 | Destabilizing | 0.999 | D | 0.741 | deleterious | N | 0.480980798 | None | None | I |
S/P | 0.9752 | likely_pathogenic | 0.9722 | pathogenic | -0.323 | Destabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | I |
S/Q | 0.7149 | likely_pathogenic | 0.725 | pathogenic | -0.718 | Destabilizing | 1.0 | D | 0.794 | deleterious | None | None | None | None | I |
S/R | 0.7865 | likely_pathogenic | 0.8129 | pathogenic | -0.36 | Destabilizing | 1.0 | D | 0.767 | deleterious | N | 0.497057136 | None | None | I |
S/T | 0.1643 | likely_benign | 0.1826 | benign | -0.464 | Destabilizing | 0.999 | D | 0.598 | neutral | N | 0.499654484 | None | None | I |
S/V | 0.3804 | ambiguous | 0.4254 | ambiguous | -0.323 | Destabilizing | 1.0 | D | 0.814 | deleterious | None | None | None | None | I |
S/W | 0.6793 | likely_pathogenic | 0.6891 | pathogenic | -1.011 | Destabilizing | 1.0 | D | 0.829 | deleterious | None | None | None | None | I |
S/Y | 0.4384 | ambiguous | 0.4625 | ambiguous | -0.747 | Destabilizing | 1.0 | D | 0.822 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.