Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24254 | 72985;72986;72987 | chr2:178573372;178573371;178573370 | chr2:179438099;179438098;179438097 |
N2AB | 22613 | 68062;68063;68064 | chr2:178573372;178573371;178573370 | chr2:179438099;179438098;179438097 |
N2A | 21686 | 65281;65282;65283 | chr2:178573372;178573371;178573370 | chr2:179438099;179438098;179438097 |
N2B | 15189 | 45790;45791;45792 | chr2:178573372;178573371;178573370 | chr2:179438099;179438098;179438097 |
Novex-1 | 15314 | 46165;46166;46167 | chr2:178573372;178573371;178573370 | chr2:179438099;179438098;179438097 |
Novex-2 | 15381 | 46366;46367;46368 | chr2:178573372;178573371;178573370 | chr2:179438099;179438098;179438097 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/N | None | None | 0.999 | D | 0.839 | 0.542 | 0.896069202243 | gnomAD-4.0.0 | 1.85578E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 2.69687E-04 | 0 | 0 | 0 |
I/V | None | None | 0.889 | N | 0.472 | 0.171 | 0.50055108712 | gnomAD-4.0.0 | 1.85602E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.25837E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.9739 | likely_pathogenic | 0.9663 | pathogenic | -2.56 | Highly Destabilizing | 0.996 | D | 0.682 | prob.neutral | None | None | None | None | I |
I/C | 0.9802 | likely_pathogenic | 0.9756 | pathogenic | -1.756 | Destabilizing | 1.0 | D | 0.753 | deleterious | None | None | None | None | I |
I/D | 0.997 | likely_pathogenic | 0.9956 | pathogenic | -2.627 | Highly Destabilizing | 1.0 | D | 0.835 | deleterious | None | None | None | None | I |
I/E | 0.9932 | likely_pathogenic | 0.9906 | pathogenic | -2.492 | Highly Destabilizing | 1.0 | D | 0.83 | deleterious | None | None | None | None | I |
I/F | 0.9045 | likely_pathogenic | 0.8651 | pathogenic | -1.647 | Destabilizing | 0.997 | D | 0.729 | prob.delet. | D | 0.53836189 | None | None | I |
I/G | 0.994 | likely_pathogenic | 0.9912 | pathogenic | -3.032 | Highly Destabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | I |
I/H | 0.9946 | likely_pathogenic | 0.9914 | pathogenic | -2.303 | Highly Destabilizing | 1.0 | D | 0.805 | deleterious | None | None | None | None | I |
I/K | 0.9818 | likely_pathogenic | 0.9727 | pathogenic | -1.924 | Destabilizing | 1.0 | D | 0.827 | deleterious | None | None | None | None | I |
I/L | 0.4915 | ambiguous | 0.4295 | ambiguous | -1.234 | Destabilizing | 0.104 | N | 0.304 | neutral | N | 0.501646401 | None | None | I |
I/M | 0.5161 | ambiguous | 0.442 | ambiguous | -1.02 | Destabilizing | 0.997 | D | 0.724 | prob.delet. | D | 0.545669725 | None | None | I |
I/N | 0.9461 | likely_pathogenic | 0.922 | pathogenic | -2.017 | Highly Destabilizing | 0.999 | D | 0.839 | deleterious | D | 0.553267049 | None | None | I |
I/P | 0.97 | likely_pathogenic | 0.9603 | pathogenic | -1.653 | Destabilizing | 1.0 | D | 0.838 | deleterious | None | None | None | None | I |
I/Q | 0.9913 | likely_pathogenic | 0.9865 | pathogenic | -2.049 | Highly Destabilizing | 1.0 | D | 0.838 | deleterious | None | None | None | None | I |
I/R | 0.9804 | likely_pathogenic | 0.9689 | pathogenic | -1.396 | Destabilizing | 1.0 | D | 0.839 | deleterious | None | None | None | None | I |
I/S | 0.9798 | likely_pathogenic | 0.9716 | pathogenic | -2.712 | Highly Destabilizing | 0.999 | D | 0.791 | deleterious | D | 0.55250658 | None | None | I |
I/T | 0.9614 | likely_pathogenic | 0.949 | pathogenic | -2.448 | Highly Destabilizing | 0.998 | D | 0.808 | deleterious | D | 0.537529424 | None | None | I |
I/V | 0.1546 | likely_benign | 0.1503 | benign | -1.653 | Destabilizing | 0.889 | D | 0.472 | neutral | N | 0.508518098 | None | None | I |
I/W | 0.9961 | likely_pathogenic | 0.9942 | pathogenic | -1.927 | Destabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | I |
I/Y | 0.9803 | likely_pathogenic | 0.9709 | pathogenic | -1.7 | Destabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.