Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24256 | 72991;72992;72993 | chr2:178573366;178573365;178573364 | chr2:179438093;179438092;179438091 |
N2AB | 22615 | 68068;68069;68070 | chr2:178573366;178573365;178573364 | chr2:179438093;179438092;179438091 |
N2A | 21688 | 65287;65288;65289 | chr2:178573366;178573365;178573364 | chr2:179438093;179438092;179438091 |
N2B | 15191 | 45796;45797;45798 | chr2:178573366;178573365;178573364 | chr2:179438093;179438092;179438091 |
Novex-1 | 15316 | 46171;46172;46173 | chr2:178573366;178573365;178573364 | chr2:179438093;179438092;179438091 |
Novex-2 | 15383 | 46372;46373;46374 | chr2:178573366;178573365;178573364 | chr2:179438093;179438092;179438091 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/D | rs187868672 | -1.704 | 0.684 | N | 0.547 | 0.203 | None | gnomAD-2.1.1 | 4.67105E-04 | None | None | None | None | N | None | 4.28E-05 | 4.36E-05 | None | 0 | 0 | None | 0 | None | 9.54E-05 | 9.04001E-04 | 3.85356E-04 |
N/D | rs187868672 | -1.704 | 0.684 | N | 0.547 | 0.203 | None | gnomAD-3.1.2 | 2.03859E-04 | None | None | None | None | N | None | 7.24E-05 | 6.56E-05 | 0 | 0 | 0 | None | 1.88501E-04 | 0 | 3.52931E-04 | 2.07125E-04 | 0 |
N/D | rs187868672 | -1.704 | 0.684 | N | 0.547 | 0.203 | None | gnomAD-4.0.0 | 2.786E-04 | None | None | None | None | N | None | 6.94502E-05 | 4.30571E-05 | None | 0 | 0 | None | 1.64198E-04 | 8.84017E-04 | 3.2356E-04 | 3.97562E-05 | 5.45312E-04 |
N/H | None | -1.455 | 0.979 | N | 0.621 | 0.293 | 0.28297238246 | gnomAD-2.1.1 | 5.54E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.14E-05 | 0 |
N/H | None | -1.455 | 0.979 | N | 0.621 | 0.293 | 0.28297238246 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
N/H | None | -1.455 | 0.979 | N | 0.621 | 0.293 | 0.28297238246 | gnomAD-4.0.0 | 1.1144E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.49471E-05 | 0 | 0 |
N/S | None | None | 0.309 | N | 0.515 | 0.097 | 0.168933306366 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 7.32654E-05 |
N/Y | rs187868672 | -0.654 | 0.979 | N | 0.739 | 0.327 | 0.430923071578 | gnomAD-2.1.1 | 5.54E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.14E-05 | 0 |
N/Y | rs187868672 | -0.654 | 0.979 | N | 0.739 | 0.327 | 0.430923071578 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
N/Y | rs187868672 | -0.654 | 0.979 | N | 0.739 | 0.327 | 0.430923071578 | gnomAD-4.0.0 | 1.96659E-06 | None | None | None | None | N | None | 2.77801E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 8.7924E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.3747 | ambiguous | 0.3538 | ambiguous | -1.544 | Destabilizing | 0.373 | N | 0.655 | neutral | None | None | None | None | N |
N/C | 0.2971 | likely_benign | 0.2677 | benign | -0.646 | Destabilizing | 0.996 | D | 0.758 | deleterious | None | None | None | None | N |
N/D | 0.2957 | likely_benign | 0.2999 | benign | -1.458 | Destabilizing | 0.684 | D | 0.547 | neutral | N | 0.520577744 | None | None | N |
N/E | 0.7534 | likely_pathogenic | 0.7409 | pathogenic | -1.242 | Destabilizing | 0.854 | D | 0.628 | neutral | None | None | None | None | N |
N/F | 0.8098 | likely_pathogenic | 0.7671 | pathogenic | -0.958 | Destabilizing | 0.984 | D | 0.779 | deleterious | None | None | None | None | N |
N/G | 0.2211 | likely_benign | 0.2069 | benign | -1.935 | Destabilizing | 0.001 | N | 0.167 | neutral | None | None | None | None | N |
N/H | 0.1324 | likely_benign | 0.1249 | benign | -1.134 | Destabilizing | 0.979 | D | 0.621 | neutral | N | 0.463473668 | None | None | N |
N/I | 0.7913 | likely_pathogenic | 0.7509 | pathogenic | -0.491 | Destabilizing | 0.884 | D | 0.793 | deleterious | N | 0.473370247 | None | None | N |
N/K | 0.5888 | likely_pathogenic | 0.5802 | pathogenic | -0.339 | Destabilizing | 0.684 | D | 0.633 | neutral | N | 0.48821461 | None | None | N |
N/L | 0.6168 | likely_pathogenic | 0.5813 | pathogenic | -0.491 | Destabilizing | 0.742 | D | 0.756 | deleterious | None | None | None | None | N |
N/M | 0.7135 | likely_pathogenic | 0.6807 | pathogenic | -0.241 | Destabilizing | 0.996 | D | 0.727 | prob.delet. | None | None | None | None | N |
N/P | 0.9609 | likely_pathogenic | 0.9585 | pathogenic | -0.817 | Destabilizing | 0.984 | D | 0.761 | deleterious | None | None | None | None | N |
N/Q | 0.5357 | ambiguous | 0.5264 | ambiguous | -0.967 | Destabilizing | 0.984 | D | 0.663 | neutral | None | None | None | None | N |
N/R | 0.5351 | ambiguous | 0.522 | ambiguous | -0.328 | Destabilizing | 0.953 | D | 0.673 | neutral | None | None | None | None | N |
N/S | 0.0871 | likely_benign | 0.0818 | benign | -1.345 | Destabilizing | 0.309 | N | 0.515 | neutral | N | 0.446194629 | None | None | N |
N/T | 0.2404 | likely_benign | 0.227 | benign | -0.932 | Destabilizing | 0.012 | N | 0.177 | neutral | N | 0.468418128 | None | None | N |
N/V | 0.7293 | likely_pathogenic | 0.6901 | pathogenic | -0.817 | Destabilizing | 0.742 | D | 0.767 | deleterious | None | None | None | None | N |
N/W | 0.9 | likely_pathogenic | 0.8799 | pathogenic | -0.636 | Destabilizing | 0.996 | D | 0.767 | deleterious | None | None | None | None | N |
N/Y | 0.3288 | likely_benign | 0.3051 | benign | -0.407 | Destabilizing | 0.979 | D | 0.739 | prob.delet. | N | 0.502165342 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.