Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24265 | 73018;73019;73020 | chr2:178573339;178573338;178573337 | chr2:179438066;179438065;179438064 |
N2AB | 22624 | 68095;68096;68097 | chr2:178573339;178573338;178573337 | chr2:179438066;179438065;179438064 |
N2A | 21697 | 65314;65315;65316 | chr2:178573339;178573338;178573337 | chr2:179438066;179438065;179438064 |
N2B | 15200 | 45823;45824;45825 | chr2:178573339;178573338;178573337 | chr2:179438066;179438065;179438064 |
Novex-1 | 15325 | 46198;46199;46200 | chr2:178573339;178573338;178573337 | chr2:179438066;179438065;179438064 |
Novex-2 | 15392 | 46399;46400;46401 | chr2:178573339;178573338;178573337 | chr2:179438066;179438065;179438064 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/S | None | None | 0.001 | N | 0.207 | 0.08 | 0.0884992946249 | gnomAD-4.0.0 | 1.787E-06 | None | None | None | None | N | None | 0 | 0 | None | 6.00673E-05 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
A/C | 0.3539 | ambiguous | 0.3372 | benign | -0.701 | Destabilizing | 0.944 | D | 0.225 | neutral | None | None | None | None | N |
A/D | 0.2382 | likely_benign | 0.2078 | benign | -0.544 | Destabilizing | 0.324 | N | 0.329 | neutral | N | 0.408193601 | None | None | N |
A/E | 0.2282 | likely_benign | 0.2027 | benign | -0.693 | Destabilizing | 0.241 | N | 0.27 | neutral | None | None | None | None | N |
A/F | 0.2637 | likely_benign | 0.2261 | benign | -0.86 | Destabilizing | 0.818 | D | 0.374 | neutral | None | None | None | None | N |
A/G | 0.1253 | likely_benign | 0.1086 | benign | -0.177 | Destabilizing | 0.001 | N | 0.173 | neutral | N | 0.394397585 | None | None | N |
A/H | 0.3555 | ambiguous | 0.328 | benign | -0.199 | Destabilizing | 0.944 | D | 0.372 | neutral | None | None | None | None | N |
A/I | 0.1758 | likely_benign | 0.1608 | benign | -0.311 | Destabilizing | 0.527 | D | 0.271 | neutral | None | None | None | None | N |
A/K | 0.3882 | ambiguous | 0.3486 | ambiguous | -0.536 | Destabilizing | 0.241 | N | 0.262 | neutral | None | None | None | None | N |
A/L | 0.1313 | likely_benign | 0.1199 | benign | -0.311 | Destabilizing | 0.241 | N | 0.242 | neutral | None | None | None | None | N |
A/M | 0.1518 | likely_benign | 0.143 | benign | -0.499 | Destabilizing | 0.944 | D | 0.263 | neutral | None | None | None | None | N |
A/N | 0.1624 | likely_benign | 0.1501 | benign | -0.176 | Destabilizing | 0.241 | N | 0.363 | neutral | None | None | None | None | N |
A/P | 0.387 | ambiguous | 0.3378 | benign | -0.234 | Destabilizing | 0.773 | D | 0.27 | neutral | N | 0.455219544 | None | None | N |
A/Q | 0.2677 | likely_benign | 0.2493 | benign | -0.441 | Destabilizing | 0.69 | D | 0.277 | neutral | None | None | None | None | N |
A/R | 0.3697 | ambiguous | 0.3268 | benign | -0.104 | Destabilizing | 0.69 | D | 0.284 | neutral | None | None | None | None | N |
A/S | 0.0852 | likely_benign | 0.0836 | benign | -0.339 | Destabilizing | 0.001 | N | 0.207 | neutral | N | 0.385338171 | None | None | N |
A/T | 0.0726 | likely_benign | 0.0724 | benign | -0.417 | Destabilizing | 0.001 | N | 0.121 | neutral | N | 0.394843089 | None | None | N |
A/V | 0.1026 | likely_benign | 0.0969 | benign | -0.234 | Destabilizing | 0.193 | N | 0.234 | neutral | N | 0.456046263 | None | None | N |
A/W | 0.6237 | likely_pathogenic | 0.5574 | ambiguous | -0.988 | Destabilizing | 0.981 | D | 0.479 | neutral | None | None | None | None | N |
A/Y | 0.3509 | ambiguous | 0.309 | benign | -0.653 | Destabilizing | 0.818 | D | 0.372 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.