Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24270 | 73033;73034;73035 | chr2:178573324;178573323;178573322 | chr2:179438051;179438050;179438049 |
N2AB | 22629 | 68110;68111;68112 | chr2:178573324;178573323;178573322 | chr2:179438051;179438050;179438049 |
N2A | 21702 | 65329;65330;65331 | chr2:178573324;178573323;178573322 | chr2:179438051;179438050;179438049 |
N2B | 15205 | 45838;45839;45840 | chr2:178573324;178573323;178573322 | chr2:179438051;179438050;179438049 |
Novex-1 | 15330 | 46213;46214;46215 | chr2:178573324;178573323;178573322 | chr2:179438051;179438050;179438049 |
Novex-2 | 15397 | 46414;46415;46416 | chr2:178573324;178573323;178573322 | chr2:179438051;179438050;179438049 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/T | None | None | 0.062 | N | 0.349 | 0.226 | 0.532696708436 | gnomAD-4.0.0 | 7.08956E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.31007E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.4234 | ambiguous | 0.3792 | ambiguous | -1.408 | Destabilizing | 0.035 | N | 0.344 | neutral | None | None | None | None | N |
I/C | 0.6195 | likely_pathogenic | 0.5808 | pathogenic | -0.804 | Destabilizing | 0.824 | D | 0.345 | neutral | None | None | None | None | N |
I/D | 0.8948 | likely_pathogenic | 0.8389 | pathogenic | -0.907 | Destabilizing | 0.555 | D | 0.413 | neutral | None | None | None | None | N |
I/E | 0.8059 | likely_pathogenic | 0.7359 | pathogenic | -0.925 | Destabilizing | 0.555 | D | 0.405 | neutral | None | None | None | None | N |
I/F | 0.2066 | likely_benign | 0.1887 | benign | -0.964 | Destabilizing | 0.317 | N | 0.386 | neutral | N | 0.479461841 | None | None | N |
I/G | 0.6099 | likely_pathogenic | 0.5398 | ambiguous | -1.695 | Destabilizing | 0.262 | N | 0.342 | neutral | None | None | None | None | N |
I/H | 0.6512 | likely_pathogenic | 0.5809 | pathogenic | -0.851 | Destabilizing | 0.935 | D | 0.43 | neutral | None | None | None | None | N |
I/K | 0.7248 | likely_pathogenic | 0.6261 | pathogenic | -0.998 | Destabilizing | 0.555 | D | 0.403 | neutral | None | None | None | None | N |
I/L | 0.1356 | likely_benign | 0.1278 | benign | -0.711 | Destabilizing | 0.005 | N | 0.223 | neutral | N | 0.445194551 | None | None | N |
I/M | 0.0938 | likely_benign | 0.0899 | benign | -0.579 | Destabilizing | 0.317 | N | 0.435 | neutral | N | 0.468668844 | None | None | N |
I/N | 0.3092 | likely_benign | 0.2729 | benign | -0.799 | Destabilizing | 0.741 | D | 0.441 | neutral | N | 0.490118765 | None | None | N |
I/P | 0.9547 | likely_pathogenic | 0.9347 | pathogenic | -0.912 | Destabilizing | 0.555 | D | 0.425 | neutral | None | None | None | None | N |
I/Q | 0.526 | ambiguous | 0.4568 | ambiguous | -0.998 | Destabilizing | 0.791 | D | 0.438 | neutral | None | None | None | None | N |
I/R | 0.6398 | likely_pathogenic | 0.5369 | ambiguous | -0.357 | Destabilizing | 0.555 | D | 0.435 | neutral | None | None | None | None | N |
I/S | 0.3476 | ambiguous | 0.3167 | benign | -1.343 | Destabilizing | 0.117 | N | 0.312 | neutral | N | 0.467628694 | None | None | N |
I/T | 0.2493 | likely_benign | 0.2186 | benign | -1.253 | Destabilizing | 0.062 | N | 0.349 | neutral | N | 0.380548427 | None | None | N |
I/V | 0.0663 | likely_benign | 0.0625 | benign | -0.912 | Destabilizing | None | N | 0.142 | neutral | N | 0.371678228 | None | None | N |
I/W | 0.8428 | likely_pathogenic | 0.7925 | pathogenic | -1.019 | Destabilizing | 0.935 | D | 0.479 | neutral | None | None | None | None | N |
I/Y | 0.5678 | likely_pathogenic | 0.5205 | ambiguous | -0.809 | Destabilizing | 0.555 | D | 0.36 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.