Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24273 | 73042;73043;73044 | chr2:178573315;178573314;178573313 | chr2:179438042;179438041;179438040 |
N2AB | 22632 | 68119;68120;68121 | chr2:178573315;178573314;178573313 | chr2:179438042;179438041;179438040 |
N2A | 21705 | 65338;65339;65340 | chr2:178573315;178573314;178573313 | chr2:179438042;179438041;179438040 |
N2B | 15208 | 45847;45848;45849 | chr2:178573315;178573314;178573313 | chr2:179438042;179438041;179438040 |
Novex-1 | 15333 | 46222;46223;46224 | chr2:178573315;178573314;178573313 | chr2:179438042;179438041;179438040 |
Novex-2 | 15400 | 46423;46424;46425 | chr2:178573315;178573314;178573313 | chr2:179438042;179438041;179438040 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/H | None | None | 1.0 | N | 0.767 | 0.356 | 0.326074293725 | gnomAD-4.0.0 | 1.70312E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.03115E-06 | 0 | 0 |
N/S | None | None | 0.999 | N | 0.607 | 0.292 | 0.285698343383 | gnomAD-4.0.0 | 6.33644E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.24262E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.6771 | likely_pathogenic | 0.6473 | pathogenic | -1.051 | Destabilizing | 1.0 | D | 0.721 | prob.delet. | None | None | None | None | N |
N/C | 0.4125 | ambiguous | 0.3897 | ambiguous | -0.13 | Destabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | N |
N/D | 0.6947 | likely_pathogenic | 0.6573 | pathogenic | -0.82 | Destabilizing | 0.999 | D | 0.643 | neutral | N | 0.493298155 | None | None | N |
N/E | 0.9401 | likely_pathogenic | 0.9283 | pathogenic | -0.645 | Destabilizing | 0.999 | D | 0.717 | prob.delet. | None | None | None | None | N |
N/F | 0.9298 | likely_pathogenic | 0.9204 | pathogenic | -0.649 | Destabilizing | 1.0 | D | 0.82 | deleterious | None | None | None | None | N |
N/G | 0.6161 | likely_pathogenic | 0.57 | pathogenic | -1.452 | Destabilizing | 0.999 | D | 0.595 | neutral | None | None | None | None | N |
N/H | 0.3152 | likely_benign | 0.3136 | benign | -1.013 | Destabilizing | 1.0 | D | 0.767 | deleterious | N | 0.475638427 | None | None | N |
N/I | 0.6585 | likely_pathogenic | 0.6472 | pathogenic | 0.004 | Stabilizing | 1.0 | D | 0.809 | deleterious | N | 0.503262108 | None | None | N |
N/K | 0.9437 | likely_pathogenic | 0.9352 | pathogenic | -0.181 | Destabilizing | 1.0 | D | 0.74 | deleterious | N | 0.497159269 | None | None | N |
N/L | 0.6269 | likely_pathogenic | 0.6267 | pathogenic | 0.004 | Stabilizing | 1.0 | D | 0.799 | deleterious | None | None | None | None | N |
N/M | 0.7551 | likely_pathogenic | 0.7458 | pathogenic | 0.377 | Stabilizing | 1.0 | D | 0.783 | deleterious | None | None | None | None | N |
N/P | 0.8922 | likely_pathogenic | 0.8959 | pathogenic | -0.318 | Destabilizing | 1.0 | D | 0.798 | deleterious | None | None | None | None | N |
N/Q | 0.8352 | likely_pathogenic | 0.8118 | pathogenic | -0.782 | Destabilizing | 1.0 | D | 0.771 | deleterious | None | None | None | None | N |
N/R | 0.9159 | likely_pathogenic | 0.9041 | pathogenic | -0.334 | Destabilizing | 1.0 | D | 0.757 | deleterious | None | None | None | None | N |
N/S | 0.1247 | likely_benign | 0.113 | benign | -1.063 | Destabilizing | 0.999 | D | 0.607 | neutral | N | 0.510187392 | None | None | N |
N/T | 0.2651 | likely_benign | 0.2634 | benign | -0.672 | Destabilizing | 0.999 | D | 0.701 | prob.neutral | N | 0.520441672 | None | None | N |
N/V | 0.5941 | likely_pathogenic | 0.5787 | pathogenic | -0.318 | Destabilizing | 1.0 | D | 0.811 | deleterious | None | None | None | None | N |
N/W | 0.9727 | likely_pathogenic | 0.9666 | pathogenic | -0.391 | Destabilizing | 1.0 | D | 0.757 | deleterious | None | None | None | None | N |
N/Y | 0.6764 | likely_pathogenic | 0.6623 | pathogenic | -0.142 | Destabilizing | 1.0 | D | 0.801 | deleterious | N | 0.488084369 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.