Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24275 | 73048;73049;73050 | chr2:178573309;178573308;178573307 | chr2:179438036;179438035;179438034 |
N2AB | 22634 | 68125;68126;68127 | chr2:178573309;178573308;178573307 | chr2:179438036;179438035;179438034 |
N2A | 21707 | 65344;65345;65346 | chr2:178573309;178573308;178573307 | chr2:179438036;179438035;179438034 |
N2B | 15210 | 45853;45854;45855 | chr2:178573309;178573308;178573307 | chr2:179438036;179438035;179438034 |
Novex-1 | 15335 | 46228;46229;46230 | chr2:178573309;178573308;178573307 | chr2:179438036;179438035;179438034 |
Novex-2 | 15402 | 46429;46430;46431 | chr2:178573309;178573308;178573307 | chr2:179438036;179438035;179438034 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/I | rs199860952 | 0.616 | 0.317 | N | 0.334 | 0.135 | None | gnomAD-2.1.1 | 4.57E-05 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 1.00644E-04 | 7.83E-05 | 0 |
K/I | rs199860952 | 0.616 | 0.317 | N | 0.334 | 0.135 | None | gnomAD-3.1.2 | 6.57E-05 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 9.42E-05 | 0 | 1.32376E-04 | 0 | 0 |
K/I | rs199860952 | 0.616 | 0.317 | N | 0.334 | 0.135 | None | gnomAD-4.0.0 | 1.2624E-04 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 6.35789E-05 | 0 | 1.64446E-04 | 0 | 6.58393E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.5049 | ambiguous | 0.479 | ambiguous | 0.071 | Stabilizing | 0.035 | N | 0.287 | neutral | None | None | None | None | I |
K/C | 0.7038 | likely_pathogenic | 0.7197 | pathogenic | -0.316 | Destabilizing | 0.935 | D | 0.232 | neutral | None | None | None | None | I |
K/D | 0.6947 | likely_pathogenic | 0.6675 | pathogenic | -0.198 | Destabilizing | 0.149 | N | 0.362 | neutral | None | None | None | None | I |
K/E | 0.3834 | ambiguous | 0.3424 | ambiguous | -0.205 | Destabilizing | 0.027 | N | 0.264 | neutral | N | 0.475786817 | None | None | I |
K/F | 0.8477 | likely_pathogenic | 0.8396 | pathogenic | -0.251 | Destabilizing | 0.555 | D | 0.263 | neutral | None | None | None | None | I |
K/G | 0.5362 | ambiguous | 0.5194 | ambiguous | -0.067 | Destabilizing | 0.149 | N | 0.315 | neutral | None | None | None | None | I |
K/H | 0.3225 | likely_benign | 0.3231 | benign | -0.199 | Destabilizing | 0.555 | D | 0.233 | neutral | None | None | None | None | I |
K/I | 0.5328 | ambiguous | 0.5272 | ambiguous | 0.355 | Stabilizing | 0.317 | N | 0.334 | neutral | N | 0.488025396 | None | None | I |
K/L | 0.5305 | ambiguous | 0.5207 | ambiguous | 0.355 | Stabilizing | 0.081 | N | 0.311 | neutral | None | None | None | None | I |
K/M | 0.3883 | ambiguous | 0.3821 | ambiguous | -0.038 | Destabilizing | 0.791 | D | 0.231 | neutral | None | None | None | None | I |
K/N | 0.5238 | ambiguous | 0.4916 | ambiguous | 0.148 | Stabilizing | 0.117 | N | 0.229 | neutral | N | 0.449891082 | None | None | I |
K/P | 0.8807 | likely_pathogenic | 0.8833 | pathogenic | 0.284 | Stabilizing | 0.555 | D | 0.341 | neutral | None | None | None | None | I |
K/Q | 0.1827 | likely_benign | 0.1717 | benign | 0.018 | Stabilizing | 0.117 | N | 0.251 | neutral | N | 0.465148536 | None | None | I |
K/R | 0.0734 | likely_benign | 0.0718 | benign | -0.033 | Destabilizing | None | N | 0.103 | neutral | N | 0.429419809 | None | None | I |
K/S | 0.5867 | likely_pathogenic | 0.5607 | ambiguous | -0.21 | Destabilizing | 0.035 | N | 0.223 | neutral | None | None | None | None | I |
K/T | 0.2921 | likely_benign | 0.2873 | benign | -0.096 | Destabilizing | None | N | 0.148 | neutral | N | 0.4280143 | None | None | I |
K/V | 0.4778 | ambiguous | 0.4731 | ambiguous | 0.284 | Stabilizing | 0.081 | N | 0.333 | neutral | None | None | None | None | I |
K/W | 0.7689 | likely_pathogenic | 0.7681 | pathogenic | -0.365 | Destabilizing | 0.935 | D | 0.251 | neutral | None | None | None | None | I |
K/Y | 0.6788 | likely_pathogenic | 0.668 | pathogenic | -0.006 | Destabilizing | 0.555 | D | 0.267 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.