Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24278 | 73057;73058;73059 | chr2:178573300;178573299;178573298 | chr2:179438027;179438026;179438025 |
N2AB | 22637 | 68134;68135;68136 | chr2:178573300;178573299;178573298 | chr2:179438027;179438026;179438025 |
N2A | 21710 | 65353;65354;65355 | chr2:178573300;178573299;178573298 | chr2:179438027;179438026;179438025 |
N2B | 15213 | 45862;45863;45864 | chr2:178573300;178573299;178573298 | chr2:179438027;179438026;179438025 |
Novex-1 | 15338 | 46237;46238;46239 | chr2:178573300;178573299;178573298 | chr2:179438027;179438026;179438025 |
Novex-2 | 15405 | 46438;46439;46440 | chr2:178573300;178573299;178573298 | chr2:179438027;179438026;179438025 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | None | None | 0.988 | N | 0.699 | 0.376 | 0.378674557249 | gnomAD-4.0.0 | 6.99078E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.12241E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0892 | likely_benign | 0.0824 | benign | -0.808 | Destabilizing | 0.067 | N | 0.241 | neutral | N | 0.502648132 | None | None | N |
T/C | 0.361 | ambiguous | 0.3275 | benign | -0.501 | Destabilizing | 0.999 | D | 0.671 | neutral | None | None | None | None | N |
T/D | 0.4563 | ambiguous | 0.4097 | ambiguous | -0.039 | Destabilizing | 0.995 | D | 0.698 | prob.neutral | None | None | None | None | N |
T/E | 0.3591 | ambiguous | 0.3218 | benign | -0.015 | Destabilizing | 0.991 | D | 0.672 | neutral | None | None | None | None | N |
T/F | 0.2674 | likely_benign | 0.227 | benign | -0.839 | Destabilizing | 0.995 | D | 0.689 | prob.neutral | None | None | None | None | N |
T/G | 0.1816 | likely_benign | 0.1653 | benign | -1.083 | Destabilizing | 0.938 | D | 0.593 | neutral | None | None | None | None | N |
T/H | 0.2088 | likely_benign | 0.1873 | benign | -1.271 | Destabilizing | 1.0 | D | 0.667 | neutral | None | None | None | None | N |
T/I | 0.2119 | likely_benign | 0.1916 | benign | -0.162 | Destabilizing | 0.988 | D | 0.699 | prob.neutral | N | 0.483440014 | None | None | N |
T/K | 0.1532 | likely_benign | 0.138 | benign | -0.661 | Destabilizing | 0.991 | D | 0.657 | neutral | None | None | None | None | N |
T/L | 0.0989 | likely_benign | 0.0896 | benign | -0.162 | Destabilizing | 0.938 | D | 0.584 | neutral | None | None | None | None | N |
T/M | 0.096 | likely_benign | 0.0894 | benign | -0.052 | Destabilizing | 1.0 | D | 0.681 | prob.neutral | None | None | None | None | N |
T/N | 0.1143 | likely_benign | 0.1057 | benign | -0.663 | Destabilizing | 0.994 | D | 0.632 | neutral | N | 0.502130844 | None | None | N |
T/P | 0.0961 | likely_benign | 0.0886 | benign | -0.345 | Destabilizing | 0.994 | D | 0.701 | prob.neutral | N | 0.47305873 | None | None | N |
T/Q | 0.1964 | likely_benign | 0.1761 | benign | -0.732 | Destabilizing | 0.995 | D | 0.702 | prob.neutral | None | None | None | None | N |
T/R | 0.1416 | likely_benign | 0.1224 | benign | -0.485 | Destabilizing | 0.995 | D | 0.695 | prob.neutral | None | None | None | None | N |
T/S | 0.1032 | likely_benign | 0.0964 | benign | -0.956 | Destabilizing | 0.919 | D | 0.403 | neutral | N | 0.467786196 | None | None | N |
T/V | 0.1536 | likely_benign | 0.1411 | benign | -0.345 | Destabilizing | 0.938 | D | 0.473 | neutral | None | None | None | None | N |
T/W | 0.5498 | ambiguous | 0.4738 | ambiguous | -0.809 | Destabilizing | 1.0 | D | 0.689 | prob.neutral | None | None | None | None | N |
T/Y | 0.2722 | likely_benign | 0.2399 | benign | -0.558 | Destabilizing | 0.998 | D | 0.688 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.