Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24280 | 73063;73064;73065 | chr2:178573294;178573293;178573292 | chr2:179438021;179438020;179438019 |
N2AB | 22639 | 68140;68141;68142 | chr2:178573294;178573293;178573292 | chr2:179438021;179438020;179438019 |
N2A | 21712 | 65359;65360;65361 | chr2:178573294;178573293;178573292 | chr2:179438021;179438020;179438019 |
N2B | 15215 | 45868;45869;45870 | chr2:178573294;178573293;178573292 | chr2:179438021;179438020;179438019 |
Novex-1 | 15340 | 46243;46244;46245 | chr2:178573294;178573293;178573292 | chr2:179438021;179438020;179438019 |
Novex-2 | 15407 | 46444;46445;46446 | chr2:178573294;178573293;178573292 | chr2:179438021;179438020;179438019 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/F | None | None | 1.0 | N | 0.681 | 0.263 | 0.464183351471 | gnomAD-4.0.0 | 1.65939E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.79799E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.4842 | ambiguous | 0.4751 | ambiguous | -2.123 | Highly Destabilizing | 0.999 | D | 0.637 | neutral | None | None | None | None | N |
L/C | 0.5351 | ambiguous | 0.5524 | ambiguous | -1.121 | Destabilizing | 1.0 | D | 0.729 | prob.delet. | None | None | None | None | N |
L/D | 0.8529 | likely_pathogenic | 0.8756 | pathogenic | -2.45 | Highly Destabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | N |
L/E | 0.582 | likely_pathogenic | 0.586 | pathogenic | -2.299 | Highly Destabilizing | 1.0 | D | 0.785 | deleterious | None | None | None | None | N |
L/F | 0.3501 | ambiguous | 0.3452 | ambiguous | -1.423 | Destabilizing | 1.0 | D | 0.681 | prob.neutral | N | 0.475101313 | None | None | N |
L/G | 0.6676 | likely_pathogenic | 0.6953 | pathogenic | -2.549 | Highly Destabilizing | 1.0 | D | 0.767 | deleterious | None | None | None | None | N |
L/H | 0.4306 | ambiguous | 0.4372 | ambiguous | -1.829 | Destabilizing | 1.0 | D | 0.799 | deleterious | None | None | None | None | N |
L/I | 0.1648 | likely_benign | 0.156 | benign | -0.927 | Destabilizing | 0.999 | D | 0.535 | neutral | N | 0.471391557 | None | None | N |
L/K | 0.3383 | likely_benign | 0.3445 | ambiguous | -1.592 | Destabilizing | 1.0 | D | 0.721 | prob.delet. | None | None | None | None | N |
L/M | 0.1486 | likely_benign | 0.148 | benign | -0.65 | Destabilizing | 1.0 | D | 0.683 | prob.neutral | None | None | None | None | N |
L/N | 0.4572 | ambiguous | 0.5187 | ambiguous | -1.774 | Destabilizing | 1.0 | D | 0.796 | deleterious | None | None | None | None | N |
L/P | 0.5677 | likely_pathogenic | 0.5688 | pathogenic | -1.305 | Destabilizing | 1.0 | D | 0.795 | deleterious | None | None | None | None | N |
L/Q | 0.2399 | likely_benign | 0.2426 | benign | -1.795 | Destabilizing | 1.0 | D | 0.77 | deleterious | None | None | None | None | N |
L/R | 0.2463 | likely_benign | 0.2433 | benign | -1.127 | Destabilizing | 1.0 | D | 0.764 | deleterious | None | None | None | None | N |
L/S | 0.5084 | ambiguous | 0.5185 | ambiguous | -2.329 | Highly Destabilizing | 1.0 | D | 0.709 | prob.delet. | N | 0.474594334 | None | None | N |
L/T | 0.2111 | likely_benign | 0.2171 | benign | -2.055 | Highly Destabilizing | 1.0 | D | 0.707 | prob.neutral | None | None | None | None | N |
L/V | 0.1331 | likely_benign | 0.131 | benign | -1.305 | Destabilizing | 0.999 | D | 0.574 | neutral | N | 0.478620032 | None | None | N |
L/W | 0.553 | ambiguous | 0.5524 | ambiguous | -1.736 | Destabilizing | 1.0 | D | 0.77 | deleterious | None | None | None | None | N |
L/Y | 0.6143 | likely_pathogenic | 0.6176 | pathogenic | -1.408 | Destabilizing | 1.0 | D | 0.739 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.