Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24291 | 73096;73097;73098 | chr2:178573261;178573260;178573259 | chr2:179437988;179437987;179437986 |
N2AB | 22650 | 68173;68174;68175 | chr2:178573261;178573260;178573259 | chr2:179437988;179437987;179437986 |
N2A | 21723 | 65392;65393;65394 | chr2:178573261;178573260;178573259 | chr2:179437988;179437987;179437986 |
N2B | 15226 | 45901;45902;45903 | chr2:178573261;178573260;178573259 | chr2:179437988;179437987;179437986 |
Novex-1 | 15351 | 46276;46277;46278 | chr2:178573261;178573260;178573259 | chr2:179437988;179437987;179437986 |
Novex-2 | 15418 | 46477;46478;46479 | chr2:178573261;178573260;178573259 | chr2:179437988;179437987;179437986 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/R | None | None | 0.942 | N | 0.489 | 0.351 | 0.213573922156 | gnomAD-4.0.0 | 2.06386E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.70918E-06 | 0 | 0 |
H/Y | None | None | 0.966 | N | 0.523 | 0.521 | 0.33110744837 | gnomAD-4.0.0 | 1.61157E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.89534E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.7511 | likely_pathogenic | 0.657 | pathogenic | -0.288 | Destabilizing | 0.86 | D | 0.497 | neutral | None | None | None | None | N |
H/C | 0.2444 | likely_benign | 0.2182 | benign | 0.704 | Stabilizing | 0.998 | D | 0.647 | neutral | None | None | None | None | N |
H/D | 0.7463 | likely_pathogenic | 0.6343 | pathogenic | -0.266 | Destabilizing | 0.698 | D | 0.503 | neutral | N | 0.484913909 | None | None | N |
H/E | 0.7599 | likely_pathogenic | 0.6708 | pathogenic | -0.185 | Destabilizing | 0.86 | D | 0.447 | neutral | None | None | None | None | N |
H/F | 0.6358 | likely_pathogenic | 0.5453 | ambiguous | 0.785 | Stabilizing | 0.993 | D | 0.51 | neutral | None | None | None | None | N |
H/G | 0.7159 | likely_pathogenic | 0.6029 | pathogenic | -0.648 | Destabilizing | 0.754 | D | 0.469 | neutral | None | None | None | None | N |
H/I | 0.7454 | likely_pathogenic | 0.6668 | pathogenic | 0.691 | Stabilizing | 0.978 | D | 0.612 | neutral | None | None | None | None | N |
H/K | 0.4827 | ambiguous | 0.4361 | ambiguous | -0.053 | Destabilizing | 0.86 | D | 0.517 | neutral | None | None | None | None | N |
H/L | 0.3911 | ambiguous | 0.3197 | benign | 0.691 | Stabilizing | 0.97 | D | 0.529 | neutral | N | 0.467455336 | None | None | N |
H/M | 0.7638 | likely_pathogenic | 0.7037 | pathogenic | 0.597 | Stabilizing | 0.998 | D | 0.572 | neutral | None | None | None | None | N |
H/N | 0.2937 | likely_benign | 0.2347 | benign | -0.026 | Destabilizing | 0.014 | N | 0.138 | neutral | N | 0.465935183 | None | None | N |
H/P | 0.8992 | likely_pathogenic | 0.8469 | pathogenic | 0.387 | Stabilizing | 0.99 | D | 0.592 | neutral | N | 0.508298083 | None | None | N |
H/Q | 0.4422 | ambiguous | 0.3811 | ambiguous | 0.197 | Stabilizing | 0.942 | D | 0.503 | neutral | N | 0.498546247 | None | None | N |
H/R | 0.1906 | likely_benign | 0.171 | benign | -0.731 | Destabilizing | 0.942 | D | 0.489 | neutral | N | 0.489617332 | None | None | N |
H/S | 0.6035 | likely_pathogenic | 0.5041 | ambiguous | 0.059 | Stabilizing | 0.754 | D | 0.458 | neutral | None | None | None | None | N |
H/T | 0.7035 | likely_pathogenic | 0.6149 | pathogenic | 0.238 | Stabilizing | 0.956 | D | 0.481 | neutral | None | None | None | None | N |
H/V | 0.6693 | likely_pathogenic | 0.5945 | pathogenic | 0.387 | Stabilizing | 0.978 | D | 0.599 | neutral | None | None | None | None | N |
H/W | 0.6703 | likely_pathogenic | 0.6093 | pathogenic | 0.929 | Stabilizing | 0.998 | D | 0.647 | neutral | None | None | None | None | N |
H/Y | 0.2745 | likely_benign | 0.2211 | benign | 1.093 | Stabilizing | 0.966 | D | 0.523 | neutral | N | 0.497195267 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.