Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24296 | 73111;73112;73113 | chr2:178573246;178573245;178573244 | chr2:179437973;179437972;179437971 |
N2AB | 22655 | 68188;68189;68190 | chr2:178573246;178573245;178573244 | chr2:179437973;179437972;179437971 |
N2A | 21728 | 65407;65408;65409 | chr2:178573246;178573245;178573244 | chr2:179437973;179437972;179437971 |
N2B | 15231 | 45916;45917;45918 | chr2:178573246;178573245;178573244 | chr2:179437973;179437972;179437971 |
Novex-1 | 15356 | 46291;46292;46293 | chr2:178573246;178573245;178573244 | chr2:179437973;179437972;179437971 |
Novex-2 | 15423 | 46492;46493;46494 | chr2:178573246;178573245;178573244 | chr2:179437973;179437972;179437971 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/G | None | None | 0.994 | D | 0.631 | 0.526 | 0.65411270277 | gnomAD-4.0.0 | 6.87461E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 1.66539E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.9375 | likely_pathogenic | 0.8928 | pathogenic | -1.828 | Destabilizing | 0.992 | D | 0.603 | neutral | None | None | None | None | N |
R/C | 0.3432 | ambiguous | 0.2569 | benign | -1.74 | Destabilizing | 1.0 | D | 0.718 | prob.delet. | None | None | None | None | N |
R/D | 0.9924 | likely_pathogenic | 0.9876 | pathogenic | -0.891 | Destabilizing | 0.999 | D | 0.651 | neutral | None | None | None | None | N |
R/E | 0.9024 | likely_pathogenic | 0.8456 | pathogenic | -0.675 | Destabilizing | 0.992 | D | 0.592 | neutral | None | None | None | None | N |
R/F | 0.9539 | likely_pathogenic | 0.9244 | pathogenic | -1.01 | Destabilizing | 1.0 | D | 0.745 | deleterious | None | None | None | None | N |
R/G | 0.9321 | likely_pathogenic | 0.8785 | pathogenic | -2.177 | Highly Destabilizing | 0.994 | D | 0.631 | neutral | D | 0.565011294 | None | None | N |
R/H | 0.173 | likely_benign | 0.1729 | benign | -1.994 | Destabilizing | 1.0 | D | 0.611 | neutral | None | None | None | None | N |
R/I | 0.863 | likely_pathogenic | 0.8023 | pathogenic | -0.817 | Destabilizing | 1.0 | D | 0.733 | prob.delet. | None | None | None | None | N |
R/K | 0.3427 | ambiguous | 0.2809 | benign | -1.202 | Destabilizing | 0.543 | D | 0.311 | neutral | N | 0.511201827 | None | None | N |
R/L | 0.7849 | likely_pathogenic | 0.7191 | pathogenic | -0.817 | Destabilizing | 0.996 | D | 0.631 | neutral | None | None | None | None | N |
R/M | 0.8634 | likely_pathogenic | 0.7797 | pathogenic | -1.337 | Destabilizing | 1.0 | D | 0.645 | neutral | D | 0.538766737 | None | None | N |
R/N | 0.9535 | likely_pathogenic | 0.9351 | pathogenic | -1.203 | Destabilizing | 0.999 | D | 0.553 | neutral | None | None | None | None | N |
R/P | 0.998 | likely_pathogenic | 0.9972 | pathogenic | -1.142 | Destabilizing | 1.0 | D | 0.681 | prob.neutral | None | None | None | None | N |
R/Q | 0.216 | likely_benign | 0.1704 | benign | -1.055 | Destabilizing | 0.998 | D | 0.551 | neutral | None | None | None | None | N |
R/S | 0.9416 | likely_pathogenic | 0.903 | pathogenic | -2.069 | Highly Destabilizing | 0.989 | D | 0.6 | neutral | D | 0.52550742 | None | None | N |
R/T | 0.9057 | likely_pathogenic | 0.8411 | pathogenic | -1.643 | Destabilizing | 0.998 | D | 0.6 | neutral | N | 0.507011544 | None | None | N |
R/V | 0.8829 | likely_pathogenic | 0.8242 | pathogenic | -1.142 | Destabilizing | 0.999 | D | 0.707 | prob.neutral | None | None | None | None | N |
R/W | 0.6192 | likely_pathogenic | 0.5347 | ambiguous | -0.558 | Destabilizing | 1.0 | D | 0.666 | neutral | D | 0.565264783 | None | None | N |
R/Y | 0.8536 | likely_pathogenic | 0.7906 | pathogenic | -0.401 | Destabilizing | 1.0 | D | 0.709 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.