Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24300 | 73123;73124;73125 | chr2:178573234;178573233;178573232 | chr2:179437961;179437960;179437959 |
N2AB | 22659 | 68200;68201;68202 | chr2:178573234;178573233;178573232 | chr2:179437961;179437960;179437959 |
N2A | 21732 | 65419;65420;65421 | chr2:178573234;178573233;178573232 | chr2:179437961;179437960;179437959 |
N2B | 15235 | 45928;45929;45930 | chr2:178573234;178573233;178573232 | chr2:179437961;179437960;179437959 |
Novex-1 | 15360 | 46303;46304;46305 | chr2:178573234;178573233;178573232 | chr2:179437961;179437960;179437959 |
Novex-2 | 15427 | 46504;46505;46506 | chr2:178573234;178573233;178573232 | chr2:179437961;179437960;179437959 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs1222244205 | -1.718 | 0.999 | N | 0.479 | 0.373 | 0.208000267992 | gnomAD-2.1.1 | 4.1E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 5.58E-05 | None | 0 | None | 0 | 0 | 0 |
E/D | rs1222244205 | -1.718 | 0.999 | N | 0.479 | 0.373 | 0.208000267992 | gnomAD-4.0.0 | 1.60856E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.78319E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.429 | ambiguous | 0.4142 | ambiguous | -1.185 | Destabilizing | 0.999 | D | 0.654 | neutral | N | 0.472797135 | None | None | N |
E/C | 0.9259 | likely_pathogenic | 0.9259 | pathogenic | -0.726 | Destabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | N |
E/D | 0.7384 | likely_pathogenic | 0.7286 | pathogenic | -1.523 | Destabilizing | 0.999 | D | 0.479 | neutral | N | 0.502968939 | None | None | N |
E/F | 0.9404 | likely_pathogenic | 0.9397 | pathogenic | -0.952 | Destabilizing | 1.0 | D | 0.889 | deleterious | None | None | None | None | N |
E/G | 0.6012 | likely_pathogenic | 0.5597 | ambiguous | -1.566 | Destabilizing | 1.0 | D | 0.745 | deleterious | N | 0.514325244 | None | None | N |
E/H | 0.8748 | likely_pathogenic | 0.8716 | pathogenic | -1.165 | Destabilizing | 1.0 | D | 0.653 | neutral | None | None | None | None | N |
E/I | 0.5598 | ambiguous | 0.5757 | pathogenic | -0.129 | Destabilizing | 1.0 | D | 0.886 | deleterious | None | None | None | None | N |
E/K | 0.3993 | ambiguous | 0.3775 | ambiguous | -1.051 | Destabilizing | 0.999 | D | 0.509 | neutral | N | 0.474798598 | None | None | N |
E/L | 0.7635 | likely_pathogenic | 0.7655 | pathogenic | -0.129 | Destabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | N |
E/M | 0.6574 | likely_pathogenic | 0.667 | pathogenic | 0.494 | Stabilizing | 1.0 | D | 0.834 | deleterious | None | None | None | None | N |
E/N | 0.8002 | likely_pathogenic | 0.7788 | pathogenic | -1.407 | Destabilizing | 1.0 | D | 0.674 | neutral | None | None | None | None | N |
E/P | 0.9972 | likely_pathogenic | 0.9975 | pathogenic | -0.462 | Destabilizing | 1.0 | D | 0.782 | deleterious | None | None | None | None | N |
E/Q | 0.2225 | likely_benign | 0.2155 | benign | -1.249 | Destabilizing | 1.0 | D | 0.596 | neutral | N | 0.482102752 | None | None | N |
E/R | 0.5992 | likely_pathogenic | 0.5824 | pathogenic | -0.881 | Destabilizing | 1.0 | D | 0.679 | prob.neutral | None | None | None | None | N |
E/S | 0.5845 | likely_pathogenic | 0.5544 | ambiguous | -1.895 | Destabilizing | 0.999 | D | 0.532 | neutral | None | None | None | None | N |
E/T | 0.6068 | likely_pathogenic | 0.57 | pathogenic | -1.558 | Destabilizing | 1.0 | D | 0.775 | deleterious | None | None | None | None | N |
E/V | 0.3501 | ambiguous | 0.3515 | ambiguous | -0.462 | Destabilizing | 1.0 | D | 0.804 | deleterious | N | 0.434566552 | None | None | N |
E/W | 0.9856 | likely_pathogenic | 0.9856 | pathogenic | -0.863 | Destabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | N |
E/Y | 0.9247 | likely_pathogenic | 0.9251 | pathogenic | -0.715 | Destabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.