Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24305 | 73138;73139;73140 | chr2:178573219;178573218;178573217 | chr2:179437946;179437945;179437944 |
N2AB | 22664 | 68215;68216;68217 | chr2:178573219;178573218;178573217 | chr2:179437946;179437945;179437944 |
N2A | 21737 | 65434;65435;65436 | chr2:178573219;178573218;178573217 | chr2:179437946;179437945;179437944 |
N2B | 15240 | 45943;45944;45945 | chr2:178573219;178573218;178573217 | chr2:179437946;179437945;179437944 |
Novex-1 | 15365 | 46318;46319;46320 | chr2:178573219;178573218;178573217 | chr2:179437946;179437945;179437944 |
Novex-2 | 15432 | 46519;46520;46521 | chr2:178573219;178573218;178573217 | chr2:179437946;179437945;179437944 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/S | None | None | 0.175 | N | 0.561 | 0.164 | 0.701967312675 | gnomAD-4.0.0 | 1.60834E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.05064E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.303 | likely_benign | 0.2099 | benign | -1.277 | Destabilizing | 0.025 | N | 0.441 | neutral | None | None | None | None | N |
I/C | 0.5001 | ambiguous | 0.4176 | ambiguous | -0.749 | Destabilizing | 0.667 | D | 0.549 | neutral | None | None | None | None | N |
I/D | 0.6342 | likely_pathogenic | 0.4928 | ambiguous | -0.561 | Destabilizing | 0.22 | N | 0.595 | neutral | None | None | None | None | N |
I/E | 0.5234 | ambiguous | 0.3826 | ambiguous | -0.626 | Destabilizing | 0.124 | N | 0.572 | neutral | None | None | None | None | N |
I/F | 0.143 | likely_benign | 0.1106 | benign | -1.101 | Destabilizing | 0.096 | N | 0.523 | neutral | N | 0.487038387 | None | None | N |
I/G | 0.5596 | ambiguous | 0.4117 | ambiguous | -1.517 | Destabilizing | 0.364 | N | 0.555 | neutral | None | None | None | None | N |
I/H | 0.4457 | ambiguous | 0.3363 | benign | -0.669 | Destabilizing | 0.667 | D | 0.585 | neutral | None | None | None | None | N |
I/K | 0.3452 | ambiguous | 0.2429 | benign | -0.668 | Destabilizing | 0.124 | N | 0.57 | neutral | None | None | None | None | N |
I/L | 0.0881 | likely_benign | 0.0772 | benign | -0.734 | Destabilizing | None | N | 0.185 | neutral | N | 0.409230964 | None | None | N |
I/M | 0.1108 | likely_benign | 0.0912 | benign | -0.506 | Destabilizing | 0.427 | N | 0.565 | neutral | N | 0.492502922 | None | None | N |
I/N | 0.2236 | likely_benign | 0.157 | benign | -0.382 | Destabilizing | 0.602 | D | 0.593 | neutral | N | 0.49107877 | None | None | N |
I/P | 0.4181 | ambiguous | 0.3299 | benign | -0.882 | Destabilizing | 0.859 | D | 0.597 | neutral | None | None | None | None | N |
I/Q | 0.3846 | ambiguous | 0.2783 | benign | -0.652 | Destabilizing | 0.011 | N | 0.533 | neutral | None | None | None | None | N |
I/R | 0.291 | likely_benign | 0.2091 | benign | -0.016 | Destabilizing | 0.22 | N | 0.592 | neutral | None | None | None | None | N |
I/S | 0.2772 | likely_benign | 0.201 | benign | -0.962 | Destabilizing | 0.175 | N | 0.561 | neutral | N | 0.495407154 | None | None | N |
I/T | 0.2218 | likely_benign | 0.1528 | benign | -0.914 | Destabilizing | 0.081 | N | 0.498 | neutral | N | 0.454099249 | None | None | N |
I/V | 0.0673 | likely_benign | 0.0584 | benign | -0.882 | Destabilizing | None | N | 0.199 | neutral | N | 0.390549203 | None | None | N |
I/W | 0.718 | likely_pathogenic | 0.6399 | pathogenic | -1.067 | Destabilizing | 0.958 | D | 0.591 | neutral | None | None | None | None | N |
I/Y | 0.4132 | ambiguous | 0.336 | benign | -0.846 | Destabilizing | 0.667 | D | 0.573 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.