Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24306 | 73141;73142;73143 | chr2:178573216;178573215;178573214 | chr2:179437943;179437942;179437941 |
N2AB | 22665 | 68218;68219;68220 | chr2:178573216;178573215;178573214 | chr2:179437943;179437942;179437941 |
N2A | 21738 | 65437;65438;65439 | chr2:178573216;178573215;178573214 | chr2:179437943;179437942;179437941 |
N2B | 15241 | 45946;45947;45948 | chr2:178573216;178573215;178573214 | chr2:179437943;179437942;179437941 |
Novex-1 | 15366 | 46321;46322;46323 | chr2:178573216;178573215;178573214 | chr2:179437943;179437942;179437941 |
Novex-2 | 15433 | 46522;46523;46524 | chr2:178573216;178573215;178573214 | chr2:179437943;179437942;179437941 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/T | rs762318997 | -1.109 | 0.969 | N | 0.711 | 0.379 | 0.26169431596 | gnomAD-2.1.1 | 4.1E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 9.05E-06 | 0 |
S/T | rs762318997 | -1.109 | 0.969 | N | 0.711 | 0.379 | 0.26169431596 | gnomAD-4.0.0 | 1.60921E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.8938E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.4377 | ambiguous | 0.4099 | ambiguous | -0.696 | Destabilizing | 0.807 | D | 0.667 | neutral | None | None | None | None | N |
S/C | 0.7178 | likely_pathogenic | 0.6662 | pathogenic | -0.575 | Destabilizing | 0.999 | D | 0.759 | deleterious | D | 0.544181106 | None | None | N |
S/D | 0.9863 | likely_pathogenic | 0.9863 | pathogenic | -1.057 | Destabilizing | 0.976 | D | 0.743 | deleterious | None | None | None | None | N |
S/E | 0.9959 | likely_pathogenic | 0.9948 | pathogenic | -0.982 | Destabilizing | 0.976 | D | 0.756 | deleterious | None | None | None | None | N |
S/F | 0.9938 | likely_pathogenic | 0.9917 | pathogenic | -0.504 | Destabilizing | 0.998 | D | 0.871 | deleterious | None | None | None | None | N |
S/G | 0.0944 | likely_benign | 0.1073 | benign | -1.03 | Destabilizing | 0.02 | N | 0.428 | neutral | N | 0.420210388 | None | None | N |
S/H | 0.9859 | likely_pathogenic | 0.9857 | pathogenic | -1.481 | Destabilizing | 0.999 | D | 0.765 | deleterious | None | None | None | None | N |
S/I | 0.9934 | likely_pathogenic | 0.9905 | pathogenic | 0.111 | Stabilizing | 0.997 | D | 0.873 | deleterious | D | 0.532571311 | None | None | N |
S/K | 0.9987 | likely_pathogenic | 0.9987 | pathogenic | -0.962 | Destabilizing | 0.976 | D | 0.755 | deleterious | None | None | None | None | N |
S/L | 0.9605 | likely_pathogenic | 0.9412 | pathogenic | 0.111 | Stabilizing | 0.993 | D | 0.829 | deleterious | None | None | None | None | N |
S/M | 0.9791 | likely_pathogenic | 0.972 | pathogenic | 0.249 | Stabilizing | 0.999 | D | 0.762 | deleterious | None | None | None | None | N |
S/N | 0.9543 | likely_pathogenic | 0.9528 | pathogenic | -1.163 | Destabilizing | 0.939 | D | 0.741 | deleterious | D | 0.543167148 | None | None | N |
S/P | 0.9887 | likely_pathogenic | 0.9852 | pathogenic | -0.122 | Destabilizing | 0.998 | D | 0.795 | deleterious | None | None | None | None | N |
S/Q | 0.993 | likely_pathogenic | 0.9923 | pathogenic | -1.144 | Destabilizing | 0.998 | D | 0.773 | deleterious | None | None | None | None | N |
S/R | 0.9974 | likely_pathogenic | 0.9969 | pathogenic | -0.984 | Destabilizing | 0.991 | D | 0.796 | deleterious | N | 0.520708027 | None | None | N |
S/T | 0.7136 | likely_pathogenic | 0.6692 | pathogenic | -0.986 | Destabilizing | 0.969 | D | 0.711 | prob.delet. | N | 0.515655144 | None | None | N |
S/V | 0.9876 | likely_pathogenic | 0.9825 | pathogenic | -0.122 | Destabilizing | 0.993 | D | 0.856 | deleterious | None | None | None | None | N |
S/W | 0.9955 | likely_pathogenic | 0.9938 | pathogenic | -0.638 | Destabilizing | 0.999 | D | 0.853 | deleterious | None | None | None | None | N |
S/Y | 0.9903 | likely_pathogenic | 0.9863 | pathogenic | -0.333 | Destabilizing | 0.998 | D | 0.871 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.