Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24308 | 73147;73148;73149 | chr2:178573210;178573209;178573208 | chr2:179437937;179437936;179437935 |
N2AB | 22667 | 68224;68225;68226 | chr2:178573210;178573209;178573208 | chr2:179437937;179437936;179437935 |
N2A | 21740 | 65443;65444;65445 | chr2:178573210;178573209;178573208 | chr2:179437937;179437936;179437935 |
N2B | 15243 | 45952;45953;45954 | chr2:178573210;178573209;178573208 | chr2:179437937;179437936;179437935 |
Novex-1 | 15368 | 46327;46328;46329 | chr2:178573210;178573209;178573208 | chr2:179437937;179437936;179437935 |
Novex-2 | 15435 | 46528;46529;46530 | chr2:178573210;178573209;178573208 | chr2:179437937;179437936;179437935 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | rs1334601287 | -1.254 | 0.955 | N | 0.622 | 0.341 | 0.227934060464 | gnomAD-2.1.1 | 4.1E-06 | None | None | None | None | N | None | 0 | 2.93E-05 | None | 0 | 0 | None | 0 | None | 0 | 0 | 0 |
P/A | rs1334601287 | -1.254 | 0.955 | N | 0.622 | 0.341 | 0.227934060464 | gnomAD-4.0.0 | 1.60722E-06 | None | None | None | None | N | None | 0 | 2.30394E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
P/R | rs1553608507 | None | 0.993 | D | 0.857 | 0.481 | 0.619820317479 | gnomAD-4.0.0 | 1.37444E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 1.7452E-04 | 9.02646E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0676 | likely_benign | 0.0677 | benign | -1.403 | Destabilizing | 0.955 | D | 0.622 | neutral | N | 0.465706791 | None | None | N |
P/C | 0.4439 | ambiguous | 0.4586 | ambiguous | -0.754 | Destabilizing | 1.0 | D | 0.869 | deleterious | None | None | None | None | N |
P/D | 0.8499 | likely_pathogenic | 0.8019 | pathogenic | -1.343 | Destabilizing | 0.995 | D | 0.801 | deleterious | None | None | None | None | N |
P/E | 0.6178 | likely_pathogenic | 0.5326 | ambiguous | -1.413 | Destabilizing | 0.995 | D | 0.783 | deleterious | None | None | None | None | N |
P/F | 0.4799 | ambiguous | 0.4573 | ambiguous | -1.321 | Destabilizing | 0.999 | D | 0.883 | deleterious | None | None | None | None | N |
P/G | 0.4535 | ambiguous | 0.47 | ambiguous | -1.641 | Destabilizing | 0.995 | D | 0.751 | deleterious | None | None | None | None | N |
P/H | 0.3849 | ambiguous | 0.3418 | ambiguous | -1.17 | Destabilizing | 1.0 | D | 0.854 | deleterious | None | None | None | None | N |
P/I | 0.3516 | ambiguous | 0.3441 | ambiguous | -0.872 | Destabilizing | 0.995 | D | 0.868 | deleterious | None | None | None | None | N |
P/K | 0.6731 | likely_pathogenic | 0.5778 | pathogenic | -1.102 | Destabilizing | 0.995 | D | 0.799 | deleterious | None | None | None | None | N |
P/L | 0.187 | likely_benign | 0.1655 | benign | -0.872 | Destabilizing | 0.987 | D | 0.798 | deleterious | N | 0.5140813 | None | None | N |
P/M | 0.3802 | ambiguous | 0.3746 | ambiguous | -0.511 | Destabilizing | 1.0 | D | 0.856 | deleterious | None | None | None | None | N |
P/N | 0.6406 | likely_pathogenic | 0.5929 | pathogenic | -0.762 | Destabilizing | 0.995 | D | 0.835 | deleterious | None | None | None | None | N |
P/Q | 0.3439 | ambiguous | 0.2855 | benign | -1.058 | Destabilizing | 0.997 | D | 0.839 | deleterious | D | 0.527465522 | None | None | N |
P/R | 0.492 | ambiguous | 0.3994 | ambiguous | -0.465 | Destabilizing | 0.993 | D | 0.857 | deleterious | D | 0.531731483 | None | None | N |
P/S | 0.1755 | likely_benign | 0.1681 | benign | -1.179 | Destabilizing | 0.987 | D | 0.728 | prob.delet. | N | 0.513120249 | None | None | N |
P/T | 0.1798 | likely_benign | 0.1671 | benign | -1.159 | Destabilizing | 0.235 | N | 0.428 | neutral | D | 0.527212032 | None | None | N |
P/V | 0.2156 | likely_benign | 0.2149 | benign | -1.015 | Destabilizing | 0.99 | D | 0.748 | deleterious | None | None | None | None | N |
P/W | 0.7495 | likely_pathogenic | 0.7478 | pathogenic | -1.42 | Destabilizing | 1.0 | D | 0.849 | deleterious | None | None | None | None | N |
P/Y | 0.5335 | ambiguous | 0.506 | ambiguous | -1.171 | Destabilizing | 1.0 | D | 0.883 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.