Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24316 | 73171;73172;73173 | chr2:178573186;178573185;178573184 | chr2:179437913;179437912;179437911 |
N2AB | 22675 | 68248;68249;68250 | chr2:178573186;178573185;178573184 | chr2:179437913;179437912;179437911 |
N2A | 21748 | 65467;65468;65469 | chr2:178573186;178573185;178573184 | chr2:179437913;179437912;179437911 |
N2B | 15251 | 45976;45977;45978 | chr2:178573186;178573185;178573184 | chr2:179437913;179437912;179437911 |
Novex-1 | 15376 | 46351;46352;46353 | chr2:178573186;178573185;178573184 | chr2:179437913;179437912;179437911 |
Novex-2 | 15443 | 46552;46553;46554 | chr2:178573186;178573185;178573184 | chr2:179437913;179437912;179437911 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | rs745520420 | 0.215 | 0.997 | N | 0.815 | 0.299 | 0.311691414656 | gnomAD-2.1.1 | 4.07E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 3.34E-05 | None | 0 | 0 | 0 |
K/E | rs745520420 | 0.215 | 0.997 | N | 0.815 | 0.299 | 0.311691414656 | gnomAD-3.1.2 | 6.57E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 2.06868E-04 | 0 |
K/E | rs745520420 | 0.215 | 0.997 | N | 0.815 | 0.299 | 0.311691414656 | gnomAD-4.0.0 | 2.4838E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 3.31236E-05 | 1.60503E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.4966 | ambiguous | 0.4945 | ambiguous | -0.194 | Destabilizing | 0.998 | D | 0.806 | deleterious | None | None | None | None | N |
K/C | 0.6841 | likely_pathogenic | 0.7031 | pathogenic | -0.314 | Destabilizing | 1.0 | D | 0.78 | deleterious | None | None | None | None | N |
K/D | 0.8691 | likely_pathogenic | 0.8593 | pathogenic | 0.088 | Stabilizing | 0.999 | D | 0.763 | deleterious | None | None | None | None | N |
K/E | 0.3304 | likely_benign | 0.3143 | benign | 0.131 | Stabilizing | 0.997 | D | 0.815 | deleterious | N | 0.503738636 | None | None | N |
K/F | 0.7965 | likely_pathogenic | 0.8028 | pathogenic | -0.192 | Destabilizing | 1.0 | D | 0.823 | deleterious | None | None | None | None | N |
K/G | 0.7493 | likely_pathogenic | 0.7376 | pathogenic | -0.464 | Destabilizing | 0.999 | D | 0.727 | deleterious | None | None | None | None | N |
K/H | 0.3452 | ambiguous | 0.3619 | ambiguous | -0.749 | Destabilizing | 1.0 | D | 0.686 | prob.delet. | None | None | None | None | N |
K/I | 0.3474 | ambiguous | 0.3582 | ambiguous | 0.459 | Stabilizing | 0.999 | D | 0.827 | deleterious | None | None | None | None | N |
K/L | 0.3689 | ambiguous | 0.3769 | ambiguous | 0.459 | Stabilizing | 0.999 | D | 0.727 | deleterious | None | None | None | None | N |
K/M | 0.2688 | likely_benign | 0.2671 | benign | 0.275 | Stabilizing | 1.0 | D | 0.679 | prob.neutral | N | 0.469501771 | None | None | N |
K/N | 0.7004 | likely_pathogenic | 0.6949 | pathogenic | 0.014 | Stabilizing | 0.999 | D | 0.698 | prob.delet. | N | 0.517379937 | None | None | N |
K/P | 0.7984 | likely_pathogenic | 0.8057 | pathogenic | 0.272 | Stabilizing | 0.999 | D | 0.745 | deleterious | None | None | None | None | N |
K/Q | 0.172 | likely_benign | 0.1697 | benign | -0.139 | Destabilizing | 0.999 | D | 0.714 | prob.delet. | N | 0.511550042 | None | None | N |
K/R | 0.0786 | likely_benign | 0.0754 | benign | -0.212 | Destabilizing | 0.997 | D | 0.758 | deleterious | N | 0.450770943 | None | None | N |
K/S | 0.6508 | likely_pathogenic | 0.6443 | pathogenic | -0.563 | Destabilizing | 0.998 | D | 0.777 | deleterious | None | None | None | None | N |
K/T | 0.2401 | likely_benign | 0.2356 | benign | -0.345 | Destabilizing | 0.999 | D | 0.733 | deleterious | N | 0.436675777 | None | None | N |
K/V | 0.3128 | likely_benign | 0.3183 | benign | 0.272 | Stabilizing | 0.999 | D | 0.771 | deleterious | None | None | None | None | N |
K/W | 0.7752 | likely_pathogenic | 0.7936 | pathogenic | -0.129 | Destabilizing | 1.0 | D | 0.809 | deleterious | None | None | None | None | N |
K/Y | 0.6778 | likely_pathogenic | 0.6857 | pathogenic | 0.191 | Stabilizing | 1.0 | D | 0.838 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.