Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24318 | 73177;73178;73179 | chr2:178573180;178573179;178573178 | chr2:179437907;179437906;179437905 |
N2AB | 22677 | 68254;68255;68256 | chr2:178573180;178573179;178573178 | chr2:179437907;179437906;179437905 |
N2A | 21750 | 65473;65474;65475 | chr2:178573180;178573179;178573178 | chr2:179437907;179437906;179437905 |
N2B | 15253 | 45982;45983;45984 | chr2:178573180;178573179;178573178 | chr2:179437907;179437906;179437905 |
Novex-1 | 15378 | 46357;46358;46359 | chr2:178573180;178573179;178573178 | chr2:179437907;179437906;179437905 |
Novex-2 | 15445 | 46558;46559;46560 | chr2:178573180;178573179;178573178 | chr2:179437907;179437906;179437905 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/R | rs1443412363 | 0.121 | 0.744 | N | 0.642 | 0.231 | 0.713796121269 | gnomAD-2.1.1 | 4.06E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.97E-06 | 0 |
C/R | rs1443412363 | 0.121 | 0.744 | N | 0.642 | 0.231 | 0.713796121269 | gnomAD-4.0.0 | 2.74149E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 3.60225E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/A | 0.1956 | likely_benign | 0.1577 | benign | -1.058 | Destabilizing | 0.09 | N | 0.161 | neutral | None | None | None | None | N |
C/D | 0.4841 | ambiguous | 0.3594 | ambiguous | -0.386 | Destabilizing | 0.355 | N | 0.435 | neutral | None | None | None | None | N |
C/E | 0.4729 | ambiguous | 0.3732 | ambiguous | -0.359 | Destabilizing | 0.015 | N | 0.213 | neutral | None | None | None | None | N |
C/F | 0.139 | likely_benign | 0.101 | benign | -0.938 | Destabilizing | 0.744 | D | 0.601 | neutral | N | 0.488509805 | None | None | N |
C/G | 0.1299 | likely_benign | 0.1029 | benign | -1.273 | Destabilizing | 0.255 | N | 0.439 | neutral | N | 0.48710825 | None | None | N |
C/H | 0.2658 | likely_benign | 0.2112 | benign | -1.579 | Destabilizing | 0.96 | D | 0.493 | neutral | None | None | None | None | N |
C/I | 0.2615 | likely_benign | 0.2152 | benign | -0.553 | Destabilizing | 0.003 | N | 0.159 | neutral | None | None | None | None | N |
C/K | 0.3677 | ambiguous | 0.3147 | benign | -0.418 | Destabilizing | 0.524 | D | 0.463 | neutral | None | None | None | None | N |
C/L | 0.2888 | likely_benign | 0.2276 | benign | -0.553 | Destabilizing | 0.09 | N | 0.326 | neutral | None | None | None | None | N |
C/M | 0.3453 | ambiguous | 0.2943 | benign | -0.064 | Destabilizing | 0.794 | D | 0.363 | neutral | None | None | None | None | N |
C/N | 0.2795 | likely_benign | 0.1992 | benign | -0.274 | Destabilizing | 0.524 | D | 0.546 | neutral | None | None | None | None | N |
C/P | 0.9616 | likely_pathogenic | 0.9338 | pathogenic | -0.695 | Destabilizing | 0.887 | D | 0.604 | neutral | None | None | None | None | N |
C/Q | 0.2632 | likely_benign | 0.2223 | benign | -0.403 | Destabilizing | 0.794 | D | 0.631 | neutral | None | None | None | None | N |
C/R | 0.1574 | likely_benign | 0.1349 | benign | -0.248 | Destabilizing | 0.744 | D | 0.642 | neutral | N | 0.447896501 | None | None | N |
C/S | 0.1329 | likely_benign | 0.1011 | benign | -0.671 | Destabilizing | 0.013 | N | 0.136 | neutral | N | 0.521527468 | None | None | N |
C/T | 0.2027 | likely_benign | 0.1685 | benign | -0.501 | Destabilizing | 0.185 | N | 0.34 | neutral | None | None | None | None | N |
C/V | 0.2145 | likely_benign | 0.1895 | benign | -0.695 | Destabilizing | 0.006 | N | 0.123 | neutral | None | None | None | None | N |
C/W | 0.3757 | ambiguous | 0.284 | benign | -0.965 | Destabilizing | 0.985 | D | 0.491 | neutral | N | 0.500373089 | None | None | N |
C/Y | 0.2072 | likely_benign | 0.1431 | benign | -0.816 | Destabilizing | 0.947 | D | 0.577 | neutral | N | 0.488509805 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.