Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24326 | 73201;73202;73203 | chr2:178573156;178573155;178573154 | chr2:179437883;179437882;179437881 |
N2AB | 22685 | 68278;68279;68280 | chr2:178573156;178573155;178573154 | chr2:179437883;179437882;179437881 |
N2A | 21758 | 65497;65498;65499 | chr2:178573156;178573155;178573154 | chr2:179437883;179437882;179437881 |
N2B | 15261 | 46006;46007;46008 | chr2:178573156;178573155;178573154 | chr2:179437883;179437882;179437881 |
Novex-1 | 15386 | 46381;46382;46383 | chr2:178573156;178573155;178573154 | chr2:179437883;179437882;179437881 |
Novex-2 | 15453 | 46582;46583;46584 | chr2:178573156;178573155;178573154 | chr2:179437883;179437882;179437881 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | None | None | 1.0 | D | 0.892 | 0.45 | 0.722475063491 | gnomAD-4.0.0 | 1.59308E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43563E-05 | 0 |
P/S | None | None | 1.0 | N | 0.846 | 0.376 | 0.39843156188 | gnomAD-4.0.0 | 1.20033E-06 | None | None | None | None | N | None | 6.33473E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.1333 | likely_benign | 0.1689 | benign | -1.322 | Destabilizing | 1.0 | D | 0.829 | deleterious | N | 0.505989507 | None | None | N |
P/C | 0.6626 | likely_pathogenic | 0.7618 | pathogenic | -0.823 | Destabilizing | 1.0 | D | 0.883 | deleterious | None | None | None | None | N |
P/D | 0.9403 | likely_pathogenic | 0.9603 | pathogenic | -1.314 | Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | N |
P/E | 0.7468 | likely_pathogenic | 0.8284 | pathogenic | -1.379 | Destabilizing | 1.0 | D | 0.847 | deleterious | None | None | None | None | N |
P/F | 0.7926 | likely_pathogenic | 0.8685 | pathogenic | -1.249 | Destabilizing | 1.0 | D | 0.915 | deleterious | None | None | None | None | N |
P/G | 0.7026 | likely_pathogenic | 0.792 | pathogenic | -1.565 | Destabilizing | 1.0 | D | 0.879 | deleterious | None | None | None | None | N |
P/H | 0.5717 | likely_pathogenic | 0.6943 | pathogenic | -1.142 | Destabilizing | 1.0 | D | 0.894 | deleterious | None | None | None | None | N |
P/I | 0.565 | likely_pathogenic | 0.6808 | pathogenic | -0.778 | Destabilizing | 1.0 | D | 0.911 | deleterious | None | None | None | None | N |
P/K | 0.6967 | likely_pathogenic | 0.8164 | pathogenic | -1.043 | Destabilizing | 1.0 | D | 0.85 | deleterious | None | None | None | None | N |
P/L | 0.326 | likely_benign | 0.4371 | ambiguous | -0.778 | Destabilizing | 1.0 | D | 0.892 | deleterious | D | 0.54158744 | None | None | N |
P/M | 0.5393 | ambiguous | 0.6461 | pathogenic | -0.517 | Destabilizing | 1.0 | D | 0.891 | deleterious | None | None | None | None | N |
P/N | 0.7937 | likely_pathogenic | 0.8637 | pathogenic | -0.718 | Destabilizing | 1.0 | D | 0.905 | deleterious | None | None | None | None | N |
P/Q | 0.4288 | ambiguous | 0.5577 | ambiguous | -1.005 | Destabilizing | 1.0 | D | 0.863 | deleterious | N | 0.486323169 | None | None | N |
P/R | 0.5597 | ambiguous | 0.7001 | pathogenic | -0.459 | Destabilizing | 1.0 | D | 0.907 | deleterious | N | 0.51398653 | None | None | N |
P/S | 0.3436 | ambiguous | 0.4491 | ambiguous | -1.136 | Destabilizing | 1.0 | D | 0.846 | deleterious | N | 0.491171787 | None | None | N |
P/T | 0.363 | ambiguous | 0.501 | ambiguous | -1.109 | Destabilizing | 1.0 | D | 0.846 | deleterious | N | 0.500263595 | None | None | N |
P/V | 0.4343 | ambiguous | 0.5541 | ambiguous | -0.925 | Destabilizing | 1.0 | D | 0.889 | deleterious | None | None | None | None | N |
P/W | 0.938 | likely_pathogenic | 0.966 | pathogenic | -1.353 | Destabilizing | 1.0 | D | 0.898 | deleterious | None | None | None | None | N |
P/Y | 0.8145 | likely_pathogenic | 0.8894 | pathogenic | -1.087 | Destabilizing | 1.0 | D | 0.919 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.