Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24327 | 73204;73205;73206 | chr2:178573153;178573152;178573151 | chr2:179437880;179437879;179437878 |
N2AB | 22686 | 68281;68282;68283 | chr2:178573153;178573152;178573151 | chr2:179437880;179437879;179437878 |
N2A | 21759 | 65500;65501;65502 | chr2:178573153;178573152;178573151 | chr2:179437880;179437879;179437878 |
N2B | 15262 | 46009;46010;46011 | chr2:178573153;178573152;178573151 | chr2:179437880;179437879;179437878 |
Novex-1 | 15387 | 46384;46385;46386 | chr2:178573153;178573152;178573151 | chr2:179437880;179437879;179437878 |
Novex-2 | 15454 | 46585;46586;46587 | chr2:178573153;178573152;178573151 | chr2:179437880;179437879;179437878 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/Q | rs748006828 | -1.857 | 0.988 | D | 0.855 | 0.54 | 0.686611096917 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.91E-06 | 0 |
P/Q | rs748006828 | -1.857 | 0.988 | D | 0.855 | 0.54 | 0.686611096917 | gnomAD-4.0.0 | 1.59301E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86092E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.7402 | likely_pathogenic | 0.7189 | pathogenic | -2.24 | Highly Destabilizing | 0.919 | D | 0.784 | deleterious | D | 0.525875582 | None | None | N |
P/C | 0.9734 | likely_pathogenic | 0.9722 | pathogenic | -1.862 | Destabilizing | 1.0 | D | 0.928 | deleterious | None | None | None | None | N |
P/D | 0.9997 | likely_pathogenic | 0.9996 | pathogenic | -3.146 | Highly Destabilizing | 0.991 | D | 0.835 | deleterious | None | None | None | None | N |
P/E | 0.9988 | likely_pathogenic | 0.9985 | pathogenic | -2.951 | Highly Destabilizing | 0.991 | D | 0.824 | deleterious | None | None | None | None | N |
P/F | 0.9995 | likely_pathogenic | 0.9992 | pathogenic | -1.288 | Destabilizing | 0.999 | D | 0.947 | deleterious | None | None | None | None | N |
P/G | 0.9935 | likely_pathogenic | 0.9924 | pathogenic | -2.754 | Highly Destabilizing | 0.938 | D | 0.865 | deleterious | None | None | None | None | N |
P/H | 0.9986 | likely_pathogenic | 0.9982 | pathogenic | -2.556 | Highly Destabilizing | 1.0 | D | 0.917 | deleterious | None | None | None | None | N |
P/I | 0.9618 | likely_pathogenic | 0.9461 | pathogenic | -0.803 | Destabilizing | 0.995 | D | 0.925 | deleterious | None | None | None | None | N |
P/K | 0.9992 | likely_pathogenic | 0.9991 | pathogenic | -2.054 | Highly Destabilizing | 0.991 | D | 0.833 | deleterious | None | None | None | None | N |
P/L | 0.927 | likely_pathogenic | 0.9163 | pathogenic | -0.803 | Destabilizing | 0.988 | D | 0.924 | deleterious | D | 0.572679929 | None | None | N |
P/M | 0.9906 | likely_pathogenic | 0.9872 | pathogenic | -0.869 | Destabilizing | 1.0 | D | 0.921 | deleterious | None | None | None | None | N |
P/N | 0.9994 | likely_pathogenic | 0.9992 | pathogenic | -2.306 | Highly Destabilizing | 0.991 | D | 0.905 | deleterious | None | None | None | None | N |
P/Q | 0.9975 | likely_pathogenic | 0.9969 | pathogenic | -2.189 | Highly Destabilizing | 0.988 | D | 0.855 | deleterious | D | 0.54795631 | None | None | N |
P/R | 0.9966 | likely_pathogenic | 0.996 | pathogenic | -1.791 | Destabilizing | 0.988 | D | 0.906 | deleterious | D | 0.573947377 | None | None | N |
P/S | 0.982 | likely_pathogenic | 0.9775 | pathogenic | -2.848 | Highly Destabilizing | 0.414 | N | 0.688 | prob.neutral | D | 0.551323671 | None | None | N |
P/T | 0.9588 | likely_pathogenic | 0.9261 | pathogenic | -2.526 | Highly Destabilizing | 0.976 | D | 0.803 | deleterious | D | 0.573440398 | None | None | N |
P/V | 0.8707 | likely_pathogenic | 0.823 | pathogenic | -1.256 | Destabilizing | 0.991 | D | 0.91 | deleterious | None | None | None | None | N |
P/W | 0.9999 | likely_pathogenic | 0.9998 | pathogenic | -1.865 | Destabilizing | 1.0 | D | 0.898 | deleterious | None | None | None | None | N |
P/Y | 0.9997 | likely_pathogenic | 0.9996 | pathogenic | -1.529 | Destabilizing | 1.0 | D | 0.948 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.