Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24330 | 73213;73214;73215 | chr2:178573144;178573143;178573142 | chr2:179437871;179437870;179437869 |
N2AB | 22689 | 68290;68291;68292 | chr2:178573144;178573143;178573142 | chr2:179437871;179437870;179437869 |
N2A | 21762 | 65509;65510;65511 | chr2:178573144;178573143;178573142 | chr2:179437871;179437870;179437869 |
N2B | 15265 | 46018;46019;46020 | chr2:178573144;178573143;178573142 | chr2:179437871;179437870;179437869 |
Novex-1 | 15390 | 46393;46394;46395 | chr2:178573144;178573143;178573142 | chr2:179437871;179437870;179437869 |
Novex-2 | 15457 | 46594;46595;46596 | chr2:178573144;178573143;178573142 | chr2:179437871;179437870;179437869 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/S | rs878888593 | None | 0.805 | N | 0.707 | 0.409 | None | gnomAD-4.0.0 | 1.59259E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.8603E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.2383 | likely_benign | 0.2874 | benign | -1.864 | Destabilizing | 0.025 | N | 0.535 | neutral | N | 0.469976433 | None | None | N |
P/C | 0.816 | likely_pathogenic | 0.8435 | pathogenic | -1.306 | Destabilizing | 0.999 | D | 0.781 | deleterious | None | None | None | None | N |
P/D | 0.9975 | likely_pathogenic | 0.9974 | pathogenic | -2.271 | Highly Destabilizing | 0.987 | D | 0.709 | prob.delet. | None | None | None | None | N |
P/E | 0.9884 | likely_pathogenic | 0.9898 | pathogenic | -2.194 | Highly Destabilizing | 0.975 | D | 0.709 | prob.delet. | None | None | None | None | N |
P/F | 0.9637 | likely_pathogenic | 0.9719 | pathogenic | -1.305 | Destabilizing | 0.975 | D | 0.815 | deleterious | None | None | None | None | N |
P/G | 0.9079 | likely_pathogenic | 0.9192 | pathogenic | -2.275 | Highly Destabilizing | 0.845 | D | 0.731 | prob.delet. | None | None | None | None | N |
P/H | 0.9618 | likely_pathogenic | 0.9651 | pathogenic | -1.983 | Destabilizing | 0.999 | D | 0.732 | prob.delet. | None | None | None | None | N |
P/I | 0.6587 | likely_pathogenic | 0.7255 | pathogenic | -0.786 | Destabilizing | 0.95 | D | 0.781 | deleterious | None | None | None | None | N |
P/K | 0.9896 | likely_pathogenic | 0.9902 | pathogenic | -1.67 | Destabilizing | 0.975 | D | 0.707 | prob.neutral | None | None | None | None | N |
P/L | 0.495 | ambiguous | 0.5347 | ambiguous | -0.786 | Destabilizing | 0.056 | N | 0.675 | prob.neutral | N | 0.483760435 | None | None | N |
P/M | 0.8367 | likely_pathogenic | 0.8632 | pathogenic | -0.607 | Destabilizing | 0.993 | D | 0.741 | deleterious | None | None | None | None | N |
P/N | 0.9882 | likely_pathogenic | 0.9877 | pathogenic | -1.613 | Destabilizing | 0.987 | D | 0.725 | prob.delet. | None | None | None | None | N |
P/Q | 0.9503 | likely_pathogenic | 0.9559 | pathogenic | -1.686 | Destabilizing | 0.983 | D | 0.674 | neutral | D | 0.535342788 | None | None | N |
P/R | 0.9725 | likely_pathogenic | 0.9744 | pathogenic | -1.224 | Destabilizing | 0.983 | D | 0.72 | prob.delet. | D | 0.535342788 | None | None | N |
P/S | 0.7747 | likely_pathogenic | 0.7955 | pathogenic | -2.131 | Highly Destabilizing | 0.805 | D | 0.707 | prob.neutral | N | 0.516985044 | None | None | N |
P/T | 0.6172 | likely_pathogenic | 0.6357 | pathogenic | -1.94 | Destabilizing | 0.967 | D | 0.712 | prob.delet. | D | 0.52331492 | None | None | N |
P/V | 0.4833 | ambiguous | 0.5577 | ambiguous | -1.114 | Destabilizing | 0.845 | D | 0.723 | prob.delet. | None | None | None | None | N |
P/W | 0.9917 | likely_pathogenic | 0.9936 | pathogenic | -1.686 | Destabilizing | 0.999 | D | 0.753 | deleterious | None | None | None | None | N |
P/Y | 0.9819 | likely_pathogenic | 0.9862 | pathogenic | -1.365 | Destabilizing | 0.987 | D | 0.816 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.