Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 24337 | 73234;73235;73236 | chr2:178573123;178573122;178573121 | chr2:179437850;179437849;179437848 |
N2AB | 22696 | 68311;68312;68313 | chr2:178573123;178573122;178573121 | chr2:179437850;179437849;179437848 |
N2A | 21769 | 65530;65531;65532 | chr2:178573123;178573122;178573121 | chr2:179437850;179437849;179437848 |
N2B | 15272 | 46039;46040;46041 | chr2:178573123;178573122;178573121 | chr2:179437850;179437849;179437848 |
Novex-1 | 15397 | 46414;46415;46416 | chr2:178573123;178573122;178573121 | chr2:179437850;179437849;179437848 |
Novex-2 | 15464 | 46615;46616;46617 | chr2:178573123;178573122;178573121 | chr2:179437850;179437849;179437848 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/T | None | None | 0.684 | N | 0.485 | 0.129 | 0.263140351381 | gnomAD-4.0.0 | 2.40064E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.625E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.3186 | likely_benign | 0.2976 | benign | -0.52 | Destabilizing | 0.373 | N | 0.462 | neutral | None | None | None | None | N |
R/C | 0.1537 | likely_benign | 0.1508 | benign | -0.483 | Destabilizing | 0.996 | D | 0.573 | neutral | None | None | None | None | N |
R/D | 0.6949 | likely_pathogenic | 0.6441 | pathogenic | -0.217 | Destabilizing | 0.742 | D | 0.499 | neutral | None | None | None | None | N |
R/E | 0.4185 | ambiguous | 0.3782 | ambiguous | -0.168 | Destabilizing | 0.373 | N | 0.459 | neutral | None | None | None | None | N |
R/F | 0.6341 | likely_pathogenic | 0.5798 | pathogenic | -0.822 | Destabilizing | 0.984 | D | 0.556 | neutral | None | None | None | None | N |
R/G | 0.219 | likely_benign | 0.1985 | benign | -0.713 | Destabilizing | 0.684 | D | 0.489 | neutral | N | 0.477805615 | None | None | N |
R/H | 0.113 | likely_benign | 0.0998 | benign | -1.09 | Destabilizing | 0.953 | D | 0.406 | neutral | None | None | None | None | N |
R/I | 0.3541 | ambiguous | 0.3087 | benign | -0.038 | Destabilizing | 0.939 | D | 0.563 | neutral | N | 0.475483388 | None | None | N |
R/K | 0.0741 | likely_benign | 0.0747 | benign | -0.516 | Destabilizing | 0.001 | N | 0.098 | neutral | N | 0.402462495 | None | None | N |
R/L | 0.2932 | likely_benign | 0.2599 | benign | -0.038 | Destabilizing | 0.742 | D | 0.489 | neutral | None | None | None | None | N |
R/M | 0.3303 | likely_benign | 0.286 | benign | -0.136 | Destabilizing | 0.984 | D | 0.455 | neutral | None | None | None | None | N |
R/N | 0.5157 | ambiguous | 0.4496 | ambiguous | -0.027 | Destabilizing | 0.742 | D | 0.447 | neutral | None | None | None | None | N |
R/P | 0.4426 | ambiguous | 0.4158 | ambiguous | -0.18 | Destabilizing | 0.953 | D | 0.51 | neutral | None | None | None | None | N |
R/Q | 0.1111 | likely_benign | 0.1034 | benign | -0.319 | Destabilizing | 0.742 | D | 0.503 | neutral | None | None | None | None | N |
R/S | 0.3827 | ambiguous | 0.3414 | ambiguous | -0.618 | Destabilizing | 0.684 | D | 0.481 | neutral | N | 0.413444705 | None | None | N |
R/T | 0.2839 | likely_benign | 0.2342 | benign | -0.438 | Destabilizing | 0.684 | D | 0.485 | neutral | N | 0.491561559 | None | None | N |
R/V | 0.3992 | ambiguous | 0.3603 | ambiguous | -0.18 | Destabilizing | 0.91 | D | 0.519 | neutral | None | None | None | None | N |
R/W | 0.3449 | ambiguous | 0.2959 | benign | -0.697 | Destabilizing | 0.996 | D | 0.667 | neutral | None | None | None | None | N |
R/Y | 0.4659 | ambiguous | 0.4209 | ambiguous | -0.318 | Destabilizing | 0.984 | D | 0.534 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.